FFCP PHASE1:Hg19::chr11:118075251..118075262,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=120425 | |EntrezGene=120425 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=19084 | |HGNC=19084 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-300bp_to_uc001psg.2_5end | |association_with_transcript=-300bp_to_uc001psg.2_5end | ||
|cluster_id=chr11:118075251..118075262,- | |||
|coexpression_cluster_id=C205 | |||
|description=CAGE_peak_7_at_AMICA1_5end | |description=CAGE_peak_7_at_AMICA1_5end | ||
|id=chr11:118075251..118075262,- | |id=chr11:118075251..118075262,- | ||
|ontology_enrichment_celltype=CL:0000990!1.34e-29!8;CL:0000840!4.91e-29!5;CL:0001029!4.91e-29!5;CL:0000451!3.18e-24!10;CL:0002127!6.97e-12!1;CL:0000914!6.97e-12!1;CL:0000911!6.97e-12!1;CL:0000814!6.97e-12!1;CL:0002042!6.97e-12!1;CL:0002039!6.97e-12!1;CL:0002040!6.97e-12!1;CL:0002041!6.97e-12!1;CL:0000453!2.27e-09!5 | |ontology_enrichment_celltype=CL:0000990!1.34e-29!8;CL:0000840!4.91e-29!5;CL:0001029!4.91e-29!5;CL:0000451!3.18e-24!10;CL:0002127!6.97e-12!1;CL:0000914!6.97e-12!1;CL:0000911!6.97e-12!1;CL:0000814!6.97e-12!1;CL:0002042!6.97e-12!1;CL:0002039!6.97e-12!1;CL:0002040!6.97e-12!1;CL:0002041!6.97e-12!1;CL:0000453!2.27e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.15e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.15e-09,25;CL:0000827,2.15e-09,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!2.63e-12!1;DOID:0060061!2.63e-12!1;DOID:8691!2.63e-12!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;5.42e-195;1!DOID:0060061;5.42e-195;1!DOID:8691;5.42e-195;1!DOID:0060058;3.81e-21;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,5.42e-195,1;DOID:0060061,5.42e-195,1;DOID:8691,5.42e-195,1;DOID:0060058,3.81e-21,10 | |||
|ontology_enrichment_uberon=UBERON:0002370!6.32e-24!4;UBERON:0005058!6.32e-24!4;UBERON:0009113!6.32e-24!4;UBERON:0003295!6.32e-24!4;UBERON:0005562!6.32e-24!4;UBERON:0004177!8.68e-24!7;UBERON:0003351!3.56e-16!6;UBERON:0000974!6.16e-10!10;UBERON:0003408!6.16e-10!10;UBERON:0001042!6.16e-10!10;UBERON:0009145!6.16e-10!10;UBERON:0005057!7.26e-10!26;UBERON:0006562!4.41e-09!11;UBERON:0009722!4.41e-09!11;UBERON:0007690!4.41e-09!11;UBERON:0008814!8.64e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p7@AMICA1 | |short_description=p7@AMICA1 | ||
}} | }} |
Latest revision as of 23:18, 15 September 2015
Short description: | p7@AMICA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_AMICA1_5end |
Coexpression cluster: | C205_mycosis_cord_hairy_xeroderma_CD4_B_b |
Association with transcript: | -300bp_to_uc001psg.2_5end |
EntrezGene: | AMICA1 |
HGNC: | 19084 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.15e-09 | 25 |
pro-T cell | 2.15e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.42e-195 | 1 |
cutaneous T cell lymphoma | 5.42e-195 | 1 |
mycosis fungoides | 5.42e-195 | 1 |
lymphoma | 3.81e-21 | 10 |