FFCP PHASE1:Hg19::chr16:2818200..2818238,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23524 | |EntrezGene=23524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16639 | |HGNC=16639 | ||
|TSSclassifier=strong | |||
|UniProt=E7EU37 | |UniProt=E7EU37 | ||
|association_with_transcript=-243bp_to_ENST00000382300_5end | |association_with_transcript=-243bp_to_ENST00000382300_5end | ||
|cluster_id=chr16:2818200..2818238,+ | |||
|description=CAGE_peak_13_at_SRRM2_5end | |description=CAGE_peak_13_at_SRRM2_5end | ||
|id=chr16:2818200..2818238,+ | |id=chr16:2818200..2818238,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.65e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.58e-09,114;UBERON:0001049,6.11e-07,56;UBERON:0005068,6.11e-07,56;UBERON:0006241,6.11e-07,56;UBERON:0007135,6.11e-07,56;UBERON:0000073,8.57e-07,53;UBERON:0002616,8.57e-07,53 | |||
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| ||
|short_description=p13@SRRM2 | |short_description=p13@SRRM2 | ||
}} | }} |
Latest revision as of 23:20, 15 September 2015
Short description: | p13@SRRM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SRRM2_5end |
Coexpression cluster: | NA |
Association with transcript: | -243bp_to_ENST00000382300_5end |
EntrezGene: | SRRM2 |
HGNC: | 16639 |
UniProt: | E7EU37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.58e-09 | 114 |
neural tube | 6.11e-07 | 56 |
neural rod | 6.11e-07 | 56 |
future spinal cord | 6.11e-07 | 56 |
neural keel | 6.11e-07 | 56 |
regional part of nervous system | 8.57e-07 | 53 |
regional part of brain | 8.57e-07 | 53 |