FFCP PHASE1:Hg19::chrX:53077964..53078018,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=54328 | |EntrezGene=54328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=18186 | |HGNC=18186 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9NS66 | |UniProt=Q9NS66 | ||
|association_with_transcript=-254bp_to_ENST00000332582_5end | |association_with_transcript=-254bp_to_ENST00000332582_5end | ||
|cluster_id=chrX:53077964..53078018,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_1_at_GPR173_5end | |description=CAGE_peak_1_at_GPR173_5end |
Latest revision as of 23:31, 15 September 2015
Short description: | p1@GPR173 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPR173_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -254bp_to_ENST00000332582_5end |
EntrezGene: | GPR173 |
HGNC: | 18186 |
UniProt: | Q9NS66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@GPR173 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 4.55e-12 | 59 |
migratory neural crest cell | 3.17e-08 | 41 |
ectodermal cell | 1.14e-07 | 72 |
neural cell | 1.77e-07 | 25 |
electrically responsive cell | 5.69e-07 | 61 |
electrically active cell | 5.69e-07 | 61 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
---|---|---|
nervous system | 1.68e-41 | 89 |
central nervous system | 2.81e-39 | 81 |
brain | 4.21e-33 | 68 |
future brain | 4.21e-33 | 68 |
neural plate | 6.46e-33 | 82 |
presumptive neural plate | 6.46e-33 | 82 |
neurectoderm | 5.60e-32 | 86 |
neural tube | 8.90e-32 | 56 |
neural rod | 8.90e-32 | 56 |
future spinal cord | 8.90e-32 | 56 |
Showing 1 to 10 of 54 entries