FFCP PHASE1:Hg19::chr2:234621551..234621595,+: Difference between revisions
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|id=chr2:234621551..234621595,+
|short_description=p1@UGT1A5
|description=CAGE_peak_1_at_UGT1A5_5end
|association_with_transcript=-42bp_to_ENST00000373414,NM_019078...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54579 | |EntrezGene=54579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12537 | |HGNC=12537 | ||
|TSSclassifier=strong | |||
|UniProt=P35504,Q5DSZ9 | |UniProt=P35504,Q5DSZ9 | ||
|association_with_transcript=-42bp_to_ENST00000373414,NM_019078,uc002vuw.2,uc010zmz.1_5end | |||
|cluster_id=chr2:234621551..234621595,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_UGT1A5_5end | |||
|id=chr2:234621551..234621595,+ | |||
|ontology_enrichment_celltype=CL:1001319!6.40e-23!1;CL:1000600!6.40e-23!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!1.65e-12!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.52e-50;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.52e-50,2 | |||
|ontology_enrichment_uberon=UBERON:0004645!6.40e-23!1;UBERON:0001256!6.40e-23!1;UBERON:0001259!6.40e-23!1;UBERON:0001255!3.62e-12!2;UBERON:0001556!3.62e-12!2;UBERON:0000160!8.59e-08!27;UBERON:0002108!7.63e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001155;2.19e-12;9!UBERON:0000059;2.16e-10;11!UBERON:0000160;7.18e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,2.19e-12,9;UBERON:0000059,2.16e-10,11;UBERON:0000160,7.18e-07,17 | |||
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|short_description=p1@UGT1A5 | |||
}} | }} |
Latest revision as of 23:37, 15 September 2015
Short description: | p1@UGT1A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UGT1A5_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -42bp_to_ENST00000373414, NM_019078, uc002vuw.2, uc010zmz.1_5end |
EntrezGene: | UGT1A5 |
HGNC: | 12537 |
UniProt: | P35504Q5DSZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
colon | 2.19e-12 | 9 |
large intestine | 2.16e-10 | 11 |
intestine | 7.18e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.52e-50 | 2 |