FFCP PHASE1:Hg19::chr16:2827261..2827299,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6923 | |EntrezGene=6923 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11619 | |HGNC=11619 | ||
|TSSclassifier=strong | |||
|UniProt=B7WPD3,Q15370 | |UniProt=B7WPD3,Q15370 | ||
|association_with_transcript=0bp_to_ENST00000262306,NM_007108,NM_207013,uc002crm.2,uc002crn.2_5end | |association_with_transcript=0bp_to_ENST00000262306,NM_007108,NM_207013,uc002crm.2,uc002crn.2_5end | ||
|cluster_id=chr16:2827261..2827299,- | |||
|coexpression_cluster_id=C385 | |||
|description=CAGE_peak_1_at_TCEB2_5end | |description=CAGE_peak_1_at_TCEB2_5end | ||
|id=chr16:2827261..2827299,- | |id=chr16:2827261..2827299,- | ||
|ontology_enrichment_celltype=CL:0000183!2.55e-20!59;CL:0000220!4.83e-20!246;CL:0002321!1.04e-19!248;CL:0000222!1.17e-19!119;CL:0000055!3.24e-19!180;CL:0000680!1.81e-18!57;CL:0000056!1.81e-18!57;CL:0000355!1.81e-18!57;CL:0000187!6.70e-18!54;CL:0000393!1.42e-16!60;CL:0000211!1.42e-16!60;CL:0000192!4.14e-16!42;CL:0000514!4.14e-16!42;CL:0002371!8.54e-16!591;CL:0000144!2.59e-15!625;CL:0000012!1.93e-14!682;CL:0000548!1.97e-14!679;CL:0000004!1.97e-14!679;CL:0000255!1.97e-14!679;CL:0000359!1.59e-12!32;CL:0000003!1.35e-09!722 | |ontology_enrichment_celltype=CL:0000183!2.55e-20!59;CL:0000220!4.83e-20!246;CL:0002321!1.04e-19!248;CL:0000222!1.17e-19!119;CL:0000055!3.24e-19!180;CL:0000680!1.81e-18!57;CL:0000056!1.81e-18!57;CL:0000355!1.81e-18!57;CL:0000187!6.70e-18!54;CL:0000393!1.42e-16!60;CL:0000211!1.42e-16!60;CL:0000192!4.14e-16!42;CL:0000514!4.14e-16!42;CL:0002371!8.54e-16!591;CL:0000144!2.59e-15!625;CL:0000012!1.93e-14!682;CL:0000548!1.97e-14!679;CL:0000004!1.97e-14!679;CL:0000255!1.97e-14!679;CL:0000359!1.59e-12!32;CL:0000003!1.35e-09!722 | ||
|ontology_enrichment_celltype_v019=CL:0000359;9.46e-12;32!CL:0000192;1.08e-11;43!CL:0000187;1.65e-10;55!CL:0000393;7.38e-09;61!CL:0000211;7.38e-09;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.01e-20,250;CL:0000222,4.61e-20,121;CL:0000680,1.17e-18,58;CL:0000056,1.17e-18,58;CL:0000355,1.17e-18,58;CL:0000187,4.36e-18,55;CL:0000393,9.06e-17,61;CL:0000211,9.06e-17,61;CL:0000192,2.79e-16,43;CL:0000514,2.79e-16,43;CL:0000359,1.59e-12,32 | |||
|ontology_enrichment_development_v019=CL:0000514;1.08e-11;43!CL:0000355;4.25e-10;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.60e-20!83;UBERON:0002329!3.60e-20!83;UBERON:0003077!3.60e-20!83;UBERON:0003059!3.60e-20!83;UBERON:0007282!3.60e-20!83;UBERON:0009618!3.60e-20!83;UBERON:0007285!3.60e-20!83;UBERON:0004290!6.80e-20!70;UBERON:0000486!1.47e-19!82;UBERON:0001134!1.02e-17!61;UBERON:0002036!1.02e-17!61;UBERON:0003082!1.02e-17!61;UBERON:0002385!2.21e-16!63;UBERON:0001015!2.21e-16!63;UBERON:0000383!2.21e-16!63;UBERON:0005256!4.55e-16!143;UBERON:0002100!8.51e-14!216;UBERON:0001009!2.43e-13!113;UBERON:0004535!9.27e-13!110;UBERON:0004872!4.82e-12!84;UBERON:0000490!5.45e-12!138;UBERON:0003914!9.49e-12!118;UBERON:0002049!2.19e-11!79;UBERON:0007798!2.19e-11!79;UBERON:0003104!6.29e-11!238;UBERON:0009142!6.29e-11!238;UBERON:0001637!2.75e-10!42;UBERON:0003509!2.75e-10!42;UBERON:0004572!2.75e-10!42;UBERON:0001981!7.40e-10!60;UBERON:0007500!7.40e-10!60;UBERON:0004537!7.40e-10!60;UBERON:0006965!7.40e-10!60;UBERON:0000926!9.64e-10!448;UBERON:0004120!9.64e-10!448;UBERON:0006603!9.64e-10!448;UBERON:0000055!1.55e-09!69;UBERON:0004573!8.18e-08!33;UBERON:0004571!8.18e-08!33;UBERON:0000483!7.88e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.62e-07;42!UBERON:0003509;4.62e-07;42!UBERON:0004572;4.62e-07;42!UBERON:0004573;5.81e-07;33!UBERON:0004571;5.81e-07;33!UBERON:0003914;8.72e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,5.44e-23,78;UBERON:0007524,2.92e-20,73;UBERON:0002329,4.28e-20,71;UBERON:0003059,4.28e-20,71;UBERON:0007282,4.28e-20,71;UBERON:0004290,4.28e-20,71;UBERON:0009618,4.28e-20,71;UBERON:0003077,7.19e-20,72;UBERON:0007285,7.19e-20,72;UBERON:0000486,9.07e-20,83;UBERON:0001134,6.48e-18,62;UBERON:0002036,6.48e-18,62;UBERON:0003082,6.48e-18,62;UBERON:0002385,1.40e-16,64;UBERON:0001015,1.40e-16,64;UBERON:0000383,1.40e-16,64;UBERON:0000490,4.06e-14,148;UBERON:0005256,8.85e-14,122;UBERON:0001009,3.48e-13,112;UBERON:0002100,5.87e-13,199;UBERON:0004535,1.32e-12,109;UBERON:0003104,1.63e-12,160;UBERON:0009142,1.63e-12,160;UBERON:0004872,6.84e-12,83;UBERON:0003914,1.46e-11,117;UBERON:0002049,3.10e-11,78;UBERON:0007798,3.10e-11,78;UBERON:0001637,2.75e-10,42;UBERON:0003509,2.75e-10,42;UBERON:0004572,2.75e-10,42;UBERON:0007500,1.04e-09,59;UBERON:0001981,1.04e-09,59;UBERON:0004537,1.04e-09,59;UBERON:0006965,1.04e-09,59;UBERON:0000055,2.17e-09,68;UBERON:0000926,2.21e-09,315;UBERON:0004120,2.21e-09,315;UBERON:0006603,2.21e-09,315;UBERON:0004573,8.18e-08,33;UBERON:0004571,8.18e-08,33;UBERON:0000483,2.70e-07,306;UBERON:0000119,3.60e-07,309 | |||
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| ||
|short_description=p1@TCEB2 | |short_description=p1@TCEB2 | ||
}} | }} |
Latest revision as of 23:39, 15 September 2015
Short description: | p1@TCEB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TCEB2_5end |
Coexpression cluster: | C385_Mesenchymal_Alveolar_Osteoblast_Smooth_Renal_Placental_Fibroblast |
Association with transcript: | 0bp_to_ENST00000262306, NM_007108, NM_207013, uc002crm.2, uc002crn.2_5end |
EntrezGene: | TCEB2 |
HGNC: | 11619 |
UniProt: | B7WPD3Q15370 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.01e-20 | 250 |
mesodermal cell | 4.61e-20 | 121 |
muscle precursor cell | 1.17e-18 | 58 |
myoblast | 1.17e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.17e-18 | 58 |
muscle cell | 4.36e-18 | 55 |
electrically responsive cell | 9.06e-17 | 61 |
electrically active cell | 9.06e-17 | 61 |
smooth muscle cell | 2.79e-16 | 43 |
smooth muscle myoblast | 2.79e-16 | 43 |
vascular associated smooth muscle cell | 1.59e-12 | 32 |