FFCP PHASE1:Hg19::chr10:103599591..103599635,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30819 | |EntrezGene=30819 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15522 | |HGNC=15522 | ||
|TSSclassifier=strong | |||
|UniProt=Q3YAC6,Q9NS61 | |UniProt=Q3YAC6,Q9NS61 | ||
|association_with_transcript=0bp_to_ENST00000348850,NM_173194,uc001ktz.2,uc010qqh.1_5end | |association_with_transcript=0bp_to_ENST00000348850,NM_173194,uc001ktz.2,uc010qqh.1_5end | ||
|cluster_id=chr10:103599591..103599635,- | |||
|coexpression_cluster_id=C271 | |coexpression_cluster_id=C271 | ||
|description=CAGE_peak_3_at_KCNIP2_5end | |description=CAGE_peak_3_at_KCNIP2_5end |
Latest revision as of 23:42, 15 September 2015
Short description: | p3@KCNIP2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCNIP2_5end |
Coexpression cluster: | C271_pineal_spinal_locus_globus_medulla_thalamus_cerebellum |
Association with transcript: | 0bp_to_ENST00000348850, NM_173194, uc001ktz.2, uc010qqh.1_5end |
EntrezGene: | KCNIP2 |
HGNC: | 15522 |
UniProt: | Q3YAC6Q9NS61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@KCNIP2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.74e-13 | 8 |
embryonic stem cell | 6.10e-10 | 5 |
neuron | 5.15e-09 | 6 |
neuroblast | 5.15e-09 | 6 |
electrically signaling cell | 5.15e-09 | 6 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.58e-100 | 81 |
neural tube | 4.83e-97 | 56 |
neural rod | 4.83e-97 | 56 |
future spinal cord | 4.83e-97 | 56 |
neural keel | 4.83e-97 | 56 |
regional part of nervous system | 2.96e-90 | 53 |
regional part of brain | 2.96e-90 | 53 |
nervous system | 1.70e-88 | 89 |
brain | 4.61e-80 | 68 |
future brain | 4.61e-80 | 68 |
Showing 1 to 10 of 81 entries