FFCP PHASE1:Hg19::chr4:147560042..147560046,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5458 | |EntrezGene=5458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9219 | |HGNC=9219 | ||
|TSSclassifier=strong | |||
|UniProt=Q12837 | |UniProt=Q12837 | ||
|association_with_transcript=0bp_to_ENST00000281321,NM_004575,uc003ikv.2_5end | |||
|cluster_id=chr4:147560042..147560046,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_1_at_POU4F2_5end | |||
|id=chr4:147560042..147560046,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;6.13e-08;5!CL:0002595;7.01e-08;5!CL:0000097;7.01e-08;5!CL:0000138;7.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.55e-08,5;CL:0002028,6.55e-08,5;CL:0002595,7.01e-08,5;CL:0000058,7.17e-07,6;CL:0000138,7.17e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!5.59e-09!1;DOID:4549!5.59e-09!1;DOID:5861!5.59e-09!1;DOID:6496!5.59e-09!1;DOID:171!4.02e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.84e-34;1!DOID:4549;1.84e-34;1!DOID:5861;1.84e-34;1!DOID:6496;1.84e-34;1!DOID:3193;7.67e-18;2!DOID:962;7.67e-18;2!DOID:171;3.47e-14;10!DOID:1192;2.31e-12;3!DOID:1115;1.21e-07;20!DOID:3095;5.57e-07;22!DOID:2994;5.57e-07;22!DOID:201;7.17e-07;6!DOID:0060100;7.17e-07;6!DOID:169;8.02e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.84e-34,1;DOID:4549,1.84e-34,1;DOID:5861,1.84e-34,1;DOID:6496,1.84e-34,1;DOID:3193,7.67e-18,2;DOID:962,7.67e-18,2;DOID:171,3.71e-14,10;DOID:1192,2.31e-12,3;DOID:1115,1.21e-07,20;DOID:3095,5.74e-07,22;DOID:2994,5.74e-07,22;DOID:201,7.17e-07,6;DOID:0060100,7.17e-07,6;DOID:169,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000988!1.55e-10!3;UBERON:0002298!1.34e-08!8;UBERON:0003076!7.72e-08!15;UBERON:0003057!7.72e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;7.67e-18;2!UBERON:0002418;1.85e-12;3!UBERON:0004755;1.85e-12;3!UBERON:0002346;1.57e-09;4!UBERON:0000923;1.57e-09;4!UBERON:0010316;1.57e-09;4!UBERON:0005291;1.57e-09;4!UBERON:0000013;6.13e-08;5!UBERON:0002410;6.13e-08;5!UBERON:0002050;7.01e-08;5!UBERON:0005423;7.01e-08;5!UBERON:0003834;7.01e-08;5!UBERON:0001533;7.01e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,7.67e-18,2;UBERON:0002418,1.85e-12,3;UBERON:0004755,1.85e-12,3;UBERON:0000013,6.13e-08,5;UBERON:0002410,6.13e-08,5;UBERON:0003834,7.01e-08,5;UBERON:0001533,7.01e-08,5 | |||
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|short_description=p1@POU4F2 | |||
}} | }} |
Latest revision as of 23:53, 15 September 2015
Short description: | p1@POU4F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_POU4F2_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 0bp_to_ENST00000281321, NM_004575, uc003ikv.2_5end |
EntrezGene: | POU4F2 |
HGNC: | 9219 |
UniProt: | Q12837 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.55e-08 | 5 |
basophil mast progenitor cell | 6.55e-08 | 5 |
smooth muscle cell of the subclavian artery | 7.01e-08 | 5 |
chondroblast | 7.17e-07 | 6 |
chondrocyte | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 7.67e-18 | 2 |
cartilage tissue | 1.85e-12 | 3 |
skeletal tissue | 1.85e-12 | 3 |
sympathetic nervous system | 6.13e-08 | 5 |
autonomic nervous system | 6.13e-08 | 5 |
thoracic segment blood vessel | 7.01e-08 | 5 |
subclavian artery | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.84e-34 | 1 |
extraosseous chondrosarcoma | 1.84e-34 | 1 |
myxoid chondrosarcoma | 1.84e-34 | 1 |
extraskeletal myxoid chondrosarcoma | 1.84e-34 | 1 |
peripheral nerve sheath neoplasm | 7.67e-18 | 2 |
neurofibroma | 7.67e-18 | 2 |
neuroectodermal tumor | 3.71e-14 | 10 |
peripheral nervous system neoplasm | 2.31e-12 | 3 |
sarcoma | 1.21e-07 | 20 |
germ cell and embryonal cancer | 5.74e-07 | 22 |
germ cell cancer | 5.74e-07 | 22 |
connective tissue cancer | 7.17e-07 | 6 |
musculoskeletal system cancer | 7.17e-07 | 6 |
neuroendocrine tumor | 8.02e-07 | 6 |