FFCP PHASE1:Hg19::chrX:53254373..53254406,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:53254373..53254406,-
|short_description=p1@KDM5C
|description=CAGE_peak_1_at_KDM5C_5end
|association_with_transcript=0bp_to_ENST00000349663,ENST00000428012...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8242 | |EntrezGene=8242 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11114 | |HGNC=11114 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7H7,F8WF56,F8WDK1 | |UniProt=F8W7H7,F8WF56,F8WDK1 | ||
|association_with_transcript=0bp_to_ENST00000349663,ENST00000428012,ENST00000429877_5end | |||
|cluster_id=chrX:53254373..53254406,- | |||
|description=CAGE_peak_1_at_KDM5C_5end | |||
|id=chrX:53254373..53254406,- | |||
|ontology_enrichment_celltype=CL:0000738!4.64e-11!140;CL:0000988!2.29e-08!182;CL:0000037!4.55e-08!172;CL:0000566!4.55e-08!172;CL:0002032!6.95e-08!165;CL:0000837!6.95e-08!165;CL:0002031!7.43e-08!124;CL:0000860!7.29e-07!45;CL:0002087!9.13e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.83e-09;33!CL:0002057;5.83e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.65e-10,136;CL:0000988,6.10e-08,177;CL:0000037,1.94e-07,168;CL:0002032,2.96e-07,161;CL:0000837,2.96e-07,161;CL:0002031,3.46e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@KDM5C | |||
}} | }} |
Latest revision as of 23:56, 15 September 2015
Short description: | p1@KDM5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KDM5C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000349663, ENST00000428012, ENST00000429877_5end |
EntrezGene: | KDM5C |
HGNC: | 11114 |
UniProt: | F8W7H7F8WF56F8WDK1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.65e-10 | 136 |
hematopoietic cell | 6.10e-08 | 177 |
hematopoietic stem cell | 1.94e-07 | 168 |
hematopoietic oligopotent progenitor cell | 2.96e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.96e-07 | 161 |
hematopoietic lineage restricted progenitor cell | 3.46e-07 | 120 |