FFCP PHASE1:Hg19::chr11:118214978..118214981,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr11:118214978..118214981,+ to FFCP PHASE1:Hg19::chr11:118214978..118214981,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=917 | |EntrezGene=917 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1675 | |HGNC=1675 | ||
|TSSclassifier=strong | |||
|UniProt=A8MUH3,B0YIY5,P09693 | |UniProt=A8MUH3,B0YIY5,P09693 | ||
|association_with_transcript=-77bp_to_ENST00000392883,ENST00000527777,ENST00000533462,NM_000073,uc001psu.2_5end | |||
|cluster_id=chr11:118214978..118214981,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_CD3G_5end | |||
|id=chr11:118214978..118214981,+ | |||
|ontology_enrichment_celltype=CL:0000084!5.06e-44!25;CL:0000827!5.06e-44!25;CL:0000791!1.80e-37!18;CL:0000789!1.80e-37!18;CL:0002420!1.80e-37!18;CL:0002419!1.80e-37!18;CL:0000790!1.80e-37!18;CL:0000625!5.11e-26!11;CL:0000838!5.25e-26!52;CL:0000542!2.06e-25!53;CL:0000051!2.06e-25!53;CL:0000738!1.52e-15!140;CL:0000624!1.86e-15!6;CL:0002087!4.62e-15!119;CL:0000898!3.05e-12!3;CL:0000037!2.49e-11!172;CL:0000566!2.49e-11!172;CL:0000623!3.73e-11!3;CL:0000825!3.73e-11!3;CL:0002031!9.63e-11!124;CL:0000842!1.66e-10!3;CL:0000988!2.52e-10!182;CL:0000815!1.24e-08!2;CL:0000792!1.24e-08!2;CL:0002677!1.24e-08!2;CL:0002032!2.34e-08!165;CL:0000837!2.34e-08!165;CL:0000224!5.38e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000084;7.04e-46;25!CL:0000791;7.13e-36;18!CL:0000789;7.13e-36;18!CL:0002419;7.13e-36;18!CL:0000625;9.75e-27;11!CL:0000898;2.50e-25;3!CL:0000815;1.72e-17;2!CL:0000792;1.72e-17;2!CL:0002677;1.72e-17;2!CL:0000624;5.62e-13;6!CL:0000542;3.36e-12;53!CL:0000895;1.30e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,5.94e-46,25;CL:0000827,5.94e-46,25;CL:0000791,5.16e-36,18;CL:0000789,5.16e-36,18;CL:0002420,5.16e-36,18;CL:0002419,5.16e-36,18;CL:0000790,5.16e-36,18;CL:0000625,1.00e-26,11;CL:0000898,1.23e-25,3;CL:0000838,4.45e-21,52;CL:0000542,1.21e-20,53;CL:0000051,1.21e-20,53;CL:0000815,1.73e-17,2;CL:0000792,1.73e-17,2;CL:0002677,1.73e-17,2;CL:0000624,3.97e-13,6;CL:0000810,6.31e-10,1;CL:0000895,6.31e-10,1;CL:0002436,6.31e-10,1;CL:0002427,6.31e-10,1;CL:0002428,6.31e-10,1;CL:0002429,6.31e-10,1;CL:0002433,6.31e-10,1;CL:0002431,6.31e-10,1;CL:0002432,6.31e-10,1;CL:0000738,1.67e-09,136;CL:0002087,2.49e-08,115;CL:0002031,6.66e-08,120;CL:0000037,3.08e-07,168;CL:0000988,9.50e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;7.13e-36;18!CL:0000051;3.36e-12;53!CL:0002427;1.30e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.48e-09!4;UBERON:0005058!1.48e-09!4;UBERON:0009113!1.48e-09!4;UBERON:0003295!1.48e-09!4;UBERON:0005562!1.48e-09!4;UBERON:0004177!6.20e-09!7;UBERON:0000178!1.24e-07!15;UBERON:0000179!1.24e-07!15;UBERON:0000463!1.24e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.43e-18;2!UBERON:0005058;2.43e-18;2!UBERON:0009113;2.43e-18;2!UBERON:0000029;1.30e-09;1!UBERON:0004177;7.20e-08;5!UBERON:0005057;7.20e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.00e-20,4;UBERON:0005058,5.00e-20,4;UBERON:0009113,5.00e-20,4;UBERON:0003295,5.00e-20,4;UBERON:0005562,5.00e-20,4;UBERON:0003351,1.52e-13,6;UBERON:0004177,1.10e-11,7;UBERON:0005057,1.10e-11,7;UBERON:0000029,8.91e-10,1;UBERON:0000974,2.51e-08,10;UBERON:0003408,2.51e-08,10;UBERON:0001042,2.51e-08,10;UBERON:0009145,2.51e-08,10;UBERON:0006562,1.31e-07,11;UBERON:0009722,1.31e-07,11;UBERON:0007690,1.31e-07,11 | |||
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| ||
|short_description=p3@CD3G | |||
}} | }} |
Latest revision as of 00:02, 16 September 2015
Short description: | p3@CD3G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD3G_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -77bp_to_ENST00000392883, ENST00000527777, ENST00000533462, NM_000073, uc001psu.2_5end |
EntrezGene: | CD3G |
HGNC: | 1675 |
UniProt: | A8MUH3B0YIY5P09693 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 5.00e-20 | 4 |
hemolymphoid system gland | 5.00e-20 | 4 |
thymic region | 5.00e-20 | 4 |
pharyngeal gland | 5.00e-20 | 4 |
thymus primordium | 5.00e-20 | 4 |
pharyngeal epithelium | 1.52e-13 | 6 |
hemopoietic organ | 1.10e-11 | 7 |
immune organ | 1.10e-11 | 7 |
lymph node | 8.91e-10 | 1 |
neck | 2.51e-08 | 10 |
gland of gut | 2.51e-08 | 10 |
chordate pharynx | 2.51e-08 | 10 |
pharyngeal region of foregut | 2.51e-08 | 10 |
pharynx | 1.31e-07 | 11 |
entire pharyngeal arch endoderm | 1.31e-07 | 11 |
early pharyngeal endoderm | 1.31e-07 | 11 |