FFCP PHASE1:Hg19::chr12:93963622..93963628,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:93963622..93963628,+
|short_description=p16@SOCS2
|description=CAGE_peak_16_at_SOCS2_5end
|association_with_transcript=24bp_to_NM_003877,uc001tcw.1_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8835 | |EntrezGene=8835 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19382 | |HGNC=19382 | ||
|TSSclassifier=strong | |||
|UniProt=A8K3D1,O14508 | |UniProt=A8K3D1,O14508 | ||
|association_with_transcript=24bp_to_NM_003877,uc001tcw.1_5end | |||
|cluster_id=chr12:93963622..93963628,+ | |||
|description=CAGE_peak_16_at_SOCS2_5end | |||
|id=chr12:93963622..93963628,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.46e-12;5!CL:0000163;5.59e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.14e-12,5;CL:0002028,4.14e-12,5;CL:0000163,6.16e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008801;8.77e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;8.77e-08;1!UBERON:0001831;8.77e-08;1!UBERON:0001567;8.77e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.54e-07,1;UBERON:0001831,1.64e-07,1;UBERON:0001567,1.64e-07,1;UBERON:0008801,1.64e-07,1 | |||
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| ||
|short_description=p16@SOCS2 | |||
}} | }} |
Latest revision as of 00:06, 16 September 2015
Short description: | p16@SOCS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SOCS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_NM_003877, uc001tcw.1_5end |
EntrezGene: | SOCS2 |
HGNC: | 19382 |
UniProt: | A8K3D1O14508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.14e-12 | 5 |
basophil mast progenitor cell | 4.14e-12 | 5 |
endocrine cell | 6.16e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 1.54e-07 | 1 |
parotid gland | 1.64e-07 | 1 |
cheek | 1.64e-07 | 1 |
parotid gland primordium | 1.64e-07 | 1 |