FFCP PHASE1:Hg19::chr7:123198284..123198329,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4698 | |EntrezGene=4698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7688 | |HGNC=7688 | ||
|TSSclassifier=strong | |||
|UniProt=Q16718 | |UniProt=Q16718 | ||
|association_with_transcript=0bp_to_ENST00000355749_5end | |association_with_transcript=0bp_to_ENST00000355749_5end | ||
|cluster_id=chr7:123198284..123198329,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_3_at_NDUFA5_5end | |description=CAGE_peak_3_at_NDUFA5_5end | ||
|id=chr7:123198284..123198329,- | |id=chr7:123198284..123198329,- | ||
|ontology_enrichment_celltype=CL:0002274!1.77e-10!5;CL:0000457!1.77e-10!5;CL:0002191!1.77e-10!5;CL:0000097!1.77e-10!5;CL:0000831!1.77e-10!5;CL:0002028!1.77e-10!5 | |ontology_enrichment_celltype=CL:0002274!1.77e-10!5;CL:0000457!1.77e-10!5;CL:0002191!1.77e-10!5;CL:0000097!1.77e-10!5;CL:0000831!1.77e-10!5;CL:0002028!1.77e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0000306;7.14e-26;4!CL:0002222;7.14e-26;4!CL:0002224;7.14e-26;4!CL:0000097;4.21e-21;5!CL:0000163;2.19e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,7.14e-26,4;CL:0002222,7.14e-26,4;CL:0002224,7.14e-26,4;CL:0000097,4.21e-21,5;CL:0002028,4.21e-21,5;CL:0000163,2.19e-12,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:6193!3.76e-13!1;DOID:3350!3.28e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001870!8.00e-25!2;UBERON:0001869!1.02e-16!32;UBERON:0001893!9.88e-16!34;UBERON:0002702!2.06e-13!1;UBERON:0002780!5.16e-13!41;UBERON:0001890!5.16e-13!41;UBERON:0006240!5.16e-13!41;UBERON:0007190!8.64e-13!1;UBERON:0001882!9.73e-13!1;UBERON:0005403!9.73e-13!1;UBERON:0003080!1.07e-12!42;UBERON:0000955!3.12e-12!69;UBERON:0006238!3.12e-12!69;UBERON:0002791!4.56e-12!33;UBERON:0001049!4.95e-12!57;UBERON:0005068!4.95e-12!57;UBERON:0006241!4.95e-12!57;UBERON:0007135!4.95e-12!57;UBERON:0002020!1.03e-11!34;UBERON:0003528!1.03e-11!34;UBERON:0002616!1.33e-11!59;UBERON:0000956!2.78e-11!25;UBERON:0000203!2.78e-11!25;UBERON:0003056!2.99e-11!61;UBERON:0001872!2.71e-10!5;UBERON:0001017!3.58e-10!82;UBERON:0003075!7.80e-10!86;UBERON:0007284!7.80e-10!86;UBERON:0005743!1.16e-09!86;UBERON:0002346!2.36e-09!90;UBERON:0001950!3.03e-09!20;UBERON:0000200!8.91e-09!6;UBERON:0000073!1.16e-08!94;UBERON:0001016!1.16e-08!94;UBERON:0002619!1.86e-08!22;UBERON:0000033!4.43e-08!123;UBERON:0000153!1.19e-07!129;UBERON:0007811!1.19e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;7.14e-26;4!UBERON:0005389;7.14e-26;4!UBERON:0000484;7.14e-26;4!UBERON:0000965;7.14e-26;4!UBERON:0001803;7.14e-26;4!UBERON:0007625;2.37e-10;11!UBERON:0001801;2.00e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,7.14e-26,4;UBERON:0005389,7.14e-26,4;UBERON:0000484,7.14e-26,4;UBERON:0002546,7.14e-26,4;UBERON:0000965,7.14e-26,4;UBERON:0001803,7.14e-26,4;UBERON:0003073,7.14e-26,4;UBERON:0005426,7.14e-26,4;UBERON:0000076,1.07e-13,8;UBERON:0007625,2.37e-10,11;UBERON:0001801,2.00e-08,14 | |||
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|short_description=p3@NDUFA5 | |short_description=p3@NDUFA5 | ||
}} | }} |
Latest revision as of 00:07, 16 September 2015
Short description: | p3@NDUFA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NDUFA5_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000355749_5end |
EntrezGene: | NDUFA5 |
HGNC: | 7688 |
UniProt: | Q16718 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 7.14e-26 | 4 |
vertebrate lens cell | 7.14e-26 | 4 |
lens epithelial cell | 7.14e-26 | 4 |
mast cell | 4.21e-21 | 5 |
basophil mast progenitor cell | 4.21e-21 | 5 |
endocrine cell | 2.19e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 7.14e-26 | 4 |
transparent eye structure | 7.14e-26 | 4 |
simple cuboidal epithelium | 7.14e-26 | 4 |
cranial placode | 7.14e-26 | 4 |
lens of camera-type eye | 7.14e-26 | 4 |
epithelium of lens | 7.14e-26 | 4 |
lens placode | 7.14e-26 | 4 |
lens vesicle | 7.14e-26 | 4 |
external ectoderm | 1.07e-13 | 8 |
pigment epithelium of eye | 2.37e-10 | 11 |
anterior segment of eyeball | 2.00e-08 | 14 |