FFCP PHASE1:Hg19::chr2:234888787..234888798,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79054 | |EntrezGene=79054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17961 | |HGNC=17961 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000477103_5end | |association_with_transcript=21bp_to_ENST00000477103_5end | ||
|cluster_id=chr2:234888787..234888798,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_4_at_TRPM8_5end | |description=CAGE_peak_4_at_TRPM8_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002582!1.15e-19!3;CL:0000181!1.72e-11!12;CL:0000417!1.72e-11!12;CL:0000668!1.72e-11!12;CL:0000414!1.72e-11!12;CL:0000412!1.72e-11!12;CL:0000182!1.72e-11!12 | |ontology_enrichment_celltype=CL:0002582!1.15e-19!3;CL:0000181!1.72e-11!12;CL:0000417!1.72e-11!12;CL:0000668!1.72e-11!12;CL:0000414!1.72e-11!12;CL:0000412!1.72e-11!12;CL:0000182!1.72e-11!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.73e-25;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.73e-25;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-25,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.67e-12!19;UBERON:0006925!1.67e-12!19;UBERON:0008836!1.67e-12!19;UBERON:0008835!7.78e-11!22;UBERON:0003894!7.78e-11!22;UBERON:0009854!2.24e-10!23;UBERON:0007499!1.45e-09!25;UBERON:0009497!1.45e-09!25;UBERON:0000015!1.45e-09!25;UBERON:0002423!1.45e-09!25;UBERON:0006235!1.45e-09!25;UBERON:0004161!1.45e-09!25;UBERON:0005057!3.32e-09!26;UBERON:0009856!3.32e-09!26;UBERON:0002365!9.36e-08!31;UBERON:0002330!9.36e-08!31;UBERON:0002368!6.86e-07!35 | |ontology_enrichment_uberon=UBERON:0002107!1.67e-12!19;UBERON:0006925!1.67e-12!19;UBERON:0008836!1.67e-12!19;UBERON:0008835!7.78e-11!22;UBERON:0003894!7.78e-11!22;UBERON:0009854!2.24e-10!23;UBERON:0007499!1.45e-09!25;UBERON:0009497!1.45e-09!25;UBERON:0000015!1.45e-09!25;UBERON:0002423!1.45e-09!25;UBERON:0006235!1.45e-09!25;UBERON:0004161!1.45e-09!25;UBERON:0005057!3.32e-09!26;UBERON:0009856!3.32e-09!26;UBERON:0002365!9.36e-08!31;UBERON:0002330!9.36e-08!31;UBERON:0002368!6.86e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.58e-28;19!UBERON:0006925;2.58e-28;19!UBERON:0002423;1.06e-21;25!UBERON:0002365;3.35e-18;31!UBERON:0002330;3.35e-18;31!UBERON:0002368;1.15e-14;33!UBERON:0000949;2.58e-12;43!UBERON:0005172;4.38e-09;52!UBERON:0005173;4.38e-09;52!UBERON:0002530;7.42e-07;57 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.58e-28;19!UBERON:0006925;2.58e-28;19!UBERON:0002423;1.06e-21;25!UBERON:0002365;3.35e-18;31!UBERON:0002330;3.35e-18;31!UBERON:0002368;1.15e-14;33!UBERON:0000949;2.58e-12;43!UBERON:0005172;4.38e-09;52!UBERON:0005173;4.38e-09;52!UBERON:0002530;7.42e-07;57 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.67e-28,19;UBERON:0006925,2.67e-28,19;UBERON:0008836,2.67e-28,19;UBERON:0008835,1.51e-24,22;UBERON:0003894,1.51e-24,22;UBERON:0009854,1.64e-23,23;UBERON:0007499,1.09e-21,25;UBERON:0009497,1.09e-21,25;UBERON:0000015,1.09e-21,25;UBERON:0002423,1.09e-21,25;UBERON:0006235,1.09e-21,25;UBERON:0004161,1.09e-21,25;UBERON:0009856,6.97e-21,26;UBERON:0002365,1.26e-17,31;UBERON:0002330,1.26e-17,31;UBERON:0002368,1.09e-15,35;UBERON:0000949,2.44e-12,45;UBERON:0003929,2.23e-10,54;UBERON:0005172,2.23e-10,54;UBERON:0005173,2.23e-10,54;UBERON:0002530,1.52e-09,59;UBERON:0002417,2.15e-09,60;UBERON:0000916,2.15e-09,60;UBERON:0005911,5.27e-07,82 | |||
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|short_description=p4@TRPM8 | |short_description=p4@TRPM8 | ||
}} | }} |
Latest revision as of 00:10, 16 September 2015
Short description: | p4@TRPM8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRPM8_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 21bp_to_ENST00000477103_5end |
EntrezGene: | TRPM8 |
HGNC: | 17961 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.81e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.67e-28 | 19 |
digestive gland | 2.67e-28 | 19 |
liver bud | 2.67e-28 | 19 |
hepatic diverticulum | 1.51e-24 | 22 |
liver primordium | 1.51e-24 | 22 |
digestive tract diverticulum | 1.64e-23 | 23 |
epithelial sac | 1.09e-21 | 25 |
epithelium of foregut-midgut junction | 1.09e-21 | 25 |
anatomical boundary | 1.09e-21 | 25 |
hepatobiliary system | 1.09e-21 | 25 |
foregut-midgut junction | 1.09e-21 | 25 |
septum transversum | 1.09e-21 | 25 |
sac | 6.97e-21 | 26 |
exocrine gland | 1.26e-17 | 31 |
exocrine system | 1.26e-17 | 31 |
endocrine gland | 1.09e-15 | 35 |
endocrine system | 2.44e-12 | 45 |
gut epithelium | 2.23e-10 | 54 |
abdomen element | 2.23e-10 | 54 |
abdominal segment element | 2.23e-10 | 54 |
gland | 1.52e-09 | 59 |
abdominal segment of trunk | 2.15e-09 | 60 |
abdomen | 2.15e-09 | 60 |
endo-epithelium | 5.27e-07 | 82 |