FFCP PHASE2:Hg19::chr12:94071341..94071357,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:8738 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:2340 |TSSclass...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8738 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=2340 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q53XL1 | ||
|association_with_transcript=-135bp_to_ENST00000542893_5end | |association_with_transcript=-135bp_to_ENST00000542893_5end | ||
|cluster_id=chr12:94071341..94071357,+ | |cluster_id=chr12:94071341..94071357,+ |
Latest revision as of 00:33, 16 September 2015
Short description: | p3@CRADD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CRADD_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | -135bp_to_ENST00000542893_5end |
EntrezGene: | CRADD |
HGNC: | 2340 |
UniProt: | Q53XL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@CRADD |
---|
0
2
4
6
8
10
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.06e-33 | 136 |
hematopoietic stem cell | 3.39e-27 | 168 |
hematopoietic cell | 1.91e-25 | 177 |
hematopoietic oligopotent progenitor cell | 3.61e-23 | 161 |
hematopoietic multipotent progenitor cell | 3.61e-23 | 161 |
granulocyte | 9.66e-21 | 8 |
hematopoietic lineage restricted progenitor cell | 1.05e-20 | 120 |
CD4-positive, alpha-beta T cell | 1.19e-20 | 6 |
lymphoid lineage restricted progenitor cell | 2.66e-20 | 52 |
nongranular leukocyte | 5.37e-20 | 115 |
Showing 1 to 10 of 38 entries
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.78e-08 | 371 |
Showing 1 to 1 of 1 entries