FFCP PHASE1:Hg19::chrX:54070879..54070917,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23133 | |EntrezGene=23133 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20672 | |HGNC=20672 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z911,Q9UPP1 | |UniProt=B7Z911,Q9UPP1 | ||
|association_with_transcript=-272bp_to_ENST00000338154,ENST00000338946,ENST00000396277,NM_001184897,NM_015107,uc004dst.2,uc004dsw.2_5end | |association_with_transcript=-272bp_to_ENST00000338154,ENST00000338946,ENST00000396277,NM_001184897,NM_015107,uc004dst.2,uc004dsw.2_5end | ||
|cluster_id=chrX:54070879..54070917,- | |||
|description=CAGE_peak_2_at_PHF8_5end | |description=CAGE_peak_2_at_PHF8_5end | ||
|id=chrX:54070879..54070917,- | |id=chrX:54070879..54070917,- | ||
|ontology_enrichment_celltype=CL:0002319!2.30e-08!25;CL:0000066!3.35e-08!254;CL:0002321!7.83e-07!248 | |ontology_enrichment_celltype=CL:0002319!2.30e-08!25;CL:0000066!3.35e-08!254;CL:0002321!7.83e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002319;7.21e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.24e-08,25;CL:0000066,5.14e-08,253;CL:0002321,4.87e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!7.31e-13!143;DOID:14566!3.10e-11!239;DOID:162!6.13e-11!235;DOID:305!4.39e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.02e-12,143;DOID:14566,4.79e-11,239;DOID:162,8.87e-11,235;DOID:305,5.42e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.10e-11!94;UBERON:0001016!6.10e-11!94;UBERON:0001017!1.65e-09!82;UBERON:0005743!2.02e-09!86;UBERON:0002346!5.30e-09!90;UBERON:0001049!2.77e-08!57;UBERON:0005068!2.77e-08!57;UBERON:0006241!2.77e-08!57;UBERON:0007135!2.77e-08!57;UBERON:0003075!3.38e-08!86;UBERON:0007284!3.38e-08!86;UBERON:0000025!7.11e-08!194;UBERON:0000483!7.53e-08!309;UBERON:0000475!1.10e-07!365;UBERON:0003056!1.44e-07!61;UBERON:0000119!1.84e-07!312;UBERON:0000955!2.02e-07!69;UBERON:0006238!2.02e-07!69;UBERON:0000924!3.57e-07!173;UBERON:0006601!3.57e-07!173;UBERON:0003080!6.70e-07!42 | |ontology_enrichment_uberon=UBERON:0000073!6.10e-11!94;UBERON:0001016!6.10e-11!94;UBERON:0001017!1.65e-09!82;UBERON:0005743!2.02e-09!86;UBERON:0002346!5.30e-09!90;UBERON:0001049!2.77e-08!57;UBERON:0005068!2.77e-08!57;UBERON:0006241!2.77e-08!57;UBERON:0007135!2.77e-08!57;UBERON:0003075!3.38e-08!86;UBERON:0007284!3.38e-08!86;UBERON:0000025!7.11e-08!194;UBERON:0000483!7.53e-08!309;UBERON:0000475!1.10e-07!365;UBERON:0003056!1.44e-07!61;UBERON:0000119!1.84e-07!312;UBERON:0000955!2.02e-07!69;UBERON:0006238!2.02e-07!69;UBERON:0000924!3.57e-07!173;UBERON:0006601!3.57e-07!173;UBERON:0003080!6.70e-07!42 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.45e-11,89;UBERON:0011216,4.27e-10,223;UBERON:0001017,3.15e-09,81;UBERON:0002346,1.61e-08,86;UBERON:0001049,5.45e-08,56;UBERON:0005068,5.45e-08,56;UBERON:0006241,5.45e-08,56;UBERON:0007135,5.45e-08,56;UBERON:0003075,1.00e-07,82;UBERON:0007284,1.00e-07,82;UBERON:0000073,1.52e-07,53;UBERON:0002616,1.52e-07,53;UBERON:0000025,1.64e-07,192;UBERON:0000483,3.36e-07,306;UBERON:0000955,3.73e-07,68;UBERON:0006238,3.73e-07,68;UBERON:0003056,6.91e-07,61;UBERON:0000119,7.86e-07,309 | |||
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| ||
|short_description=p2@PHF8 | |short_description=p2@PHF8 | ||
}} | }} |
Latest revision as of 00:53, 16 September 2015
Short description: | p2@PHF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PHF8_5end |
Coexpression cluster: | NA |
Association with transcript: | -272bp_to_ENST00000338154, ENST00000338946, ENST00000396277, NM_001184897, NM_015107, uc004dst.2, uc004dsw.2_5end |
EntrezGene: | PHF8 |
HGNC: | 20672 |
UniProt: | B7Z911Q9UPP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.24e-08 | 25 |
epithelial cell | 5.14e-08 | 253 |
embryonic cell | 4.87e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.45e-11 | 89 |
organ system subdivision | 4.27e-10 | 223 |
central nervous system | 3.15e-09 | 81 |
neurectoderm | 1.61e-08 | 86 |
neural tube | 5.45e-08 | 56 |
neural rod | 5.45e-08 | 56 |
future spinal cord | 5.45e-08 | 56 |
neural keel | 5.45e-08 | 56 |
neural plate | 1.00e-07 | 82 |
presumptive neural plate | 1.00e-07 | 82 |
regional part of nervous system | 1.52e-07 | 53 |
regional part of brain | 1.52e-07 | 53 |
tube | 1.64e-07 | 192 |
epithelium | 3.36e-07 | 306 |
brain | 3.73e-07 | 68 |
future brain | 3.73e-07 | 68 |
pre-chordal neural plate | 6.91e-07 | 61 |
cell layer | 7.86e-07 | 309 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.02e-12 | 143 |
disease of cellular proliferation | 4.79e-11 | 239 |
cancer | 8.87e-11 | 235 |
carcinoma | 5.42e-09 | 106 |