FFCP PHASE1:Hg19::chr16:28874345..28874371,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25970 | |EntrezGene=25970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30417 | |HGNC=30417 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRF2 | |UniProt=Q9NRF2 | ||
|association_with_transcript=220bp_to_AB037720_5end | |association_with_transcript=220bp_to_AB037720_5end | ||
|cluster_id=chr16:28874345..28874371,+ | |||
|coexpression_cluster_id=C423 | |||
|description=CAGE_peak_8_at_SH2B1_5end | |description=CAGE_peak_8_at_SH2B1_5end | ||
|id=chr16:28874345..28874371,+ | |id=chr16:28874345..28874371,+ | ||
|ontology_enrichment_celltype=CL:0000791!6.97e-08!18;CL:0000789!6.97e-08!18;CL:0002420!6.97e-08!18;CL:0002419!6.97e-08!18;CL:0000790!6.97e-08!18 | |ontology_enrichment_celltype=CL:0000791!6.97e-08!18;CL:0000789!6.97e-08!18;CL:0002420!6.97e-08!18;CL:0002419!6.97e-08!18;CL:0000790!6.97e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.44e-13;12!CL:0000136;2.45e-12;13!CL:0002580;8.68e-12;3!CL:0002615;2.72e-11;3!CL:0002579;6.68e-11;3!CL:0000791;4.07e-10;18!CL:0000789;4.07e-10;18!CL:0002419;4.07e-10;18!CL:0000624;7.62e-09;6!CL:0000084;9.62e-09;25!CL:0002617;3.02e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.31e-13,12;CL:0002580,9.40e-12,3;CL:0002615,2.84e-11,3;CL:0002579,5.79e-11,3;CL:0000136,1.69e-10,15;CL:0000791,4.53e-10,18;CL:0000789,4.53e-10,18;CL:0002420,4.53e-10,18;CL:0002419,4.53e-10,18;CL:0000790,4.53e-10,18;CL:0000624,4.10e-09,6;CL:0000084,1.06e-08,25;CL:0000827,1.06e-08,25;CL:0002617,3.38e-08,2;CL:0000048,3.74e-08,427;CL:0000034,3.99e-08,441;CL:0000723,6.93e-08,433;CL:0000134,7.53e-08,354;CL:0002320,1.66e-07,361;CL:0000219,6.94e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000790;4.07e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!5.29e-07!12;UBERON:0000042!5.29e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.85e-20;6!UBERON:0002358;1.85e-20;6!UBERON:0003684;1.85e-20;6!UBERON:0001178;1.85e-20;6!UBERON:0004457;2.13e-13;9!UBERON:0000042;2.13e-13;9!UBERON:0000310;6.02e-09;10!UBERON:0005406;4.28e-08;2!UBERON:0001443;4.30e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.67e-20,6;UBERON:0002358,1.67e-20,6;UBERON:0003684,1.67e-20,6;UBERON:0001178,1.67e-20,6;UBERON:0004457,6.97e-10,12;UBERON:0000042,6.97e-10,12;UBERON:0000310,6.58e-09,10;UBERON:0002384,2.48e-08,371;UBERON:0005406,3.75e-08,2;UBERON:0001443,4.65e-08,11 | |||
|phase1_expression=4.36028110249336,4.06790995392868,5.92008497203079,2.00146596706261,2.68176656656373,4.36169262050184,0,1.26343974685366,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0.229240217243854,0.492603536699674,0,0,0.767658796194425,0.309632246632152,0,0,0,0,0.284338464974843,0.880801318004542,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0.485168122375632,0.232429036905685,0,0,0.575384784644301,0,0,0.344745680736619,0,0,0.376484679085209,0,0,0.918251677112708,0.320929027076094,0.639337125799041,0,0.199463657621632,0.426224750532694,0,0.56738522469114,0,0.75374599577023,0,0.434377689410233,0,0,0.316462387440884,0.211255286311942,1.06302149982522,0,0.112328631146495,0.150176892841506,0.964353520182481,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0,0,0.560508562981536,1.05353633910031,2.360517241366,1.96505381374582,1.23360899399706,0.501559486172034,0.651844533267181,0,0,0.779873198196215,0.294605907474837,0.221533894583621,0.270803863765016,0.640456598628376,0.780356085359269,0.164437904603676,1.10540007114339,0.289803085735052,1.03800594213442,0.802622484269139,1.04535523804977,0.793165398882963,1.91610246800961,1.03088233644789,1.51811815211702,0.318565414324097,0.651083453856419,0.950452044448374,1.35517607169996,0,1.24930726552346,0.236777252044017,0.821127996921047,1.00803371612366,0.267440195783507,1.01377082717959,4.87613732627923,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0.175669571386252,0.0654895377488563,0.364295288292542,0,0,0,0.664789802594326,0.238490624305342,0.571994910780128,0.74291500265913,0,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0,0.402829317109147,0.760272105718513,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0.366403487860815,0,0,0,0,0,1.05927344650575,0.573673241497627,0.354668382198357,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0.125118519871964,0,0,0.612975591598039,0.150238058906597,0,1.61450672119976,0.213557388818567,0.211931901159562,1.50045548042201,0.103052529238439,0.515281080091258,0.18611685633159,3.37552664482532,1.26668106709558,1.7670364197088,0.276149695926898,0.323292113637624,0.710019185033229,0.201504196455281,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0.433099343283221,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0.16798212819886,0.425325291727159,0,0,0,0,0.264145302039678,0.207328115540772,0.576479813667846,0.25248486685276,0.190493682876507,0.763976851116555,0,0,0,0,0.285826432630578,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0.532844358032199,0.285955987316295,0,0.823240336780769,0,0.355391948742546,0,0.602878754119172,0.871533458600294,0.599837947092342,0,0,0,0,0,0,1.44781306667579,0.410952645100767,0.895304816199478,0.112085143993527,0.985153801009636,1.2937654491571,1.28343036279748,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0,0.415941723061614,0.356857977594324,0.946214490203608,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0,0,0,0,1.03384013061444,0.215714200818617,1.38745825144478,0,0,0.604780586659361,6.4508030032882,30.5389326843244,4.2099014164961,3.20347873139252,3.07024349440022,1.44768529029247,2.96836132889982,0,0,0.0821271560138091,0,0.348631135379878,0,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0,0.15403067420883,0.784349769176855,0,0,0,0.340187410553031,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0.325378394664303,0.206082023295445,6.86770986137576,6.8482884934088,0.574265537996172,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0.638063562472921,0,0.929691098594572,0,0,0.308033580176089,1.59691809095107,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0.38126038784765,0.255897791311334,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0.818999468447914,0.141405431953713,0,1.65409603063837,0.66343897524122,0.438450885253763,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0.573645408816206,0.0982490410131212,0.35667105148125,0,0.422215270595328,0.329294892959902,0,0,0.384888450902048,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0,1.27541018183058,0,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0,2.50634477090067,0.677167111206413,0,0.201799707191048,0,0,6.14481528616916,1.56573275524691,4.17122854279771,0,0,0,0,0.66614393599564,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0.994147647766298,0.703347082052564,0.222617410045812,0.16480387422676,0,0.19924798825107,0.828851746593443,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,6.668219408678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| ||
|short_description=p8@SH2B1 | |short_description=p8@SH2B1 | ||
}} | }} |
Latest revision as of 01:21, 16 September 2015
Short description: | p8@SH2B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SH2B1_5end |
Coexpression cluster: | C423_Preadipocyte_Adipocyte_Chondrocyte_tenocyte_Osteoblast_Synoviocyte_Fibroblast |
Association with transcript: | 220bp_to_AB037720_5end |
EntrezGene: | SH2B1 |
HGNC: | 30417 |
UniProt: | Q9NRF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.31e-13 | 12 |
preadipocyte of the breast | 9.40e-12 | 3 |
adipocyte of omentum tissue | 2.84e-11 | 3 |
omentum preadipocyte | 5.79e-11 | 3 |
fat cell | 1.69e-10 | 15 |
mature alpha-beta T cell | 4.53e-10 | 18 |
alpha-beta T cell | 4.53e-10 | 18 |
immature T cell | 4.53e-10 | 18 |
mature T cell | 4.53e-10 | 18 |
immature alpha-beta T cell | 4.53e-10 | 18 |
CD4-positive, alpha-beta T cell | 4.10e-09 | 6 |
T cell | 1.06e-08 | 25 |
pro-T cell | 1.06e-08 | 25 |
adipocyte of breast | 3.38e-08 | 2 |
multi fate stem cell | 3.74e-08 | 427 |
stem cell | 3.99e-08 | 441 |
somatic stem cell | 6.93e-08 | 433 |
mesenchymal cell | 7.53e-08 | 354 |
connective tissue cell | 1.66e-07 | 361 |
motile cell | 6.94e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.67e-20 | 6 |
peritoneum | 1.67e-20 | 6 |
abdominal cavity | 1.67e-20 | 6 |
visceral peritoneum | 1.67e-20 | 6 |
cavity lining | 6.97e-10 | 12 |
serous membrane | 6.97e-10 | 12 |
breast | 6.58e-09 | 10 |
connective tissue | 2.48e-08 | 371 |
perirenal fat | 3.75e-08 | 2 |
chest | 4.65e-08 | 11 |