FFCP PHASE1:Hg19::chr11:118754537..118754552,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=643 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1060 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001pue.3_5end | |||
|cluster_id=chr11:118754537..118754552,+ | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_3_at_CXCR5_5end | |||
|id=chr11:118754537..118754552,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.23e-59!53;CL:0000051!1.23e-59!53;CL:0000838!6.40e-58!52;CL:0000738!3.18e-46!140;CL:0002087!1.60e-44!119;CL:0000945!1.38e-35!24;CL:0000826!1.38e-35!24;CL:0002031!4.19e-35!124;CL:0000037!4.90e-34!172;CL:0000566!4.90e-34!172;CL:0000988!4.07e-31!182;CL:0002032!1.07e-30!165;CL:0000837!1.07e-30!165;CL:0000236!5.32e-24!14;CL:0000791!3.14e-22!18;CL:0000789!3.14e-22!18;CL:0002420!3.14e-22!18;CL:0002419!3.14e-22!18;CL:0000790!3.14e-22!18;CL:0000084!3.37e-19!25;CL:0000827!3.37e-19!25;CL:0000624!4.82e-13!6;CL:0000625!6.64e-13!11;CL:0000134!3.14e-07!358;CL:0000898!3.19e-07!3;CL:0000842!5.17e-07!3;CL:0002320!8.43e-07!365;CL:0000623!8.47e-07!3;CL:0000825!8.47e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.58e-44;53!CL:0000945;7.37e-39;24!CL:0000236;2.48e-38;13!CL:0000791;1.82e-33;18!CL:0000789;1.82e-33;18!CL:0002419;1.82e-33;18!CL:0000084;9.85e-27;25!CL:0000624;1.98e-21;6!CL:0000625;2.66e-17;11!CL:0002087;2.47e-14;104!CL:0000898;2.15e-11;3!CL:0000226;9.58e-11;3!CL:0000842;9.58e-11;3!CL:0000623;9.74e-11;3!CL:0000815;2.92e-08;2!CL:0000792;2.92e-08;2!CL:0002677;2.92e-08;2!CL:0000738;1.46e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.29e-75,53;CL:0000051,1.29e-75,53;CL:0000838,7.63e-73,52;CL:0002087,7.12e-40,115;CL:0000945,1.00e-38,24;CL:0000826,1.00e-38,24;CL:0000738,4.63e-36,136;CL:0000236,2.28e-35,14;CL:0000791,1.81e-33,18;CL:0000789,1.81e-33,18;CL:0002420,1.81e-33,18;CL:0002419,1.81e-33,18;CL:0000790,1.81e-33,18;CL:0002031,1.15e-29,120;CL:0000037,2.92e-27,168;CL:0000084,9.34e-27,25;CL:0000827,9.34e-27,25;CL:0000988,2.34e-25,177;CL:0002032,4.50e-24,161;CL:0000837,4.50e-24,161;CL:0000624,2.21e-21,6;CL:0000625,2.46e-17,11;CL:0000898,2.44e-11,3;CL:0000226,5.57e-11,3;CL:0000842,5.57e-11,3;CL:0000623,1.30e-10,3;CL:0000825,1.30e-10,3;CL:0000815,3.25e-08,2;CL:0000792,3.25e-08,2;CL:0002677,3.25e-08,2;CL:0000134,1.04e-07,354;CL:0002320,2.25e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000051;1.58e-44;53!CL:0000790;1.82e-33;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.85e-17!15;UBERON:0000179!8.85e-17!15;UBERON:0000463!8.85e-17!15;UBERON:0002193!3.07e-11!112;UBERON:0002390!3.68e-11!102;UBERON:0003061!3.68e-11!102;UBERON:0004177!3.85e-09!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.17e-20;15!UBERON:0000179;3.17e-20;15!UBERON:0000463;3.17e-20;15!UBERON:0002390;8.25e-12;32!UBERON:0002193;7.28e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.51e-20,15;UBERON:0000179,2.51e-20,15;UBERON:0000463,2.51e-20,15;UBERON:0002384,6.37e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.0787107813136792,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,1.00707360754392,1.13735385989937,0,0.553995408531877,1.20326668482085,0.868043482863407,0,0,0,0,0.377875943688809,0,0.232429036905685,0.411167888021826,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0.272906150057846,0,0.306083892370903,0.962787081228281,0,0,0.199463657621632,0,0,0,0,0.502497330513487,0,0,0,1.10483290796269,0,0,0,0,0,0,0,0,0,0,8.79981222306614,8.7382177801941,10.6741110463627,7.68114400619713,10.4102956629363,7.47178171940828,7.27149360063348,6.67837628174755,34.1527781465669,45.8045007709332,40.138688953149,0,1.68152568894461,0,4.72103448273199,9.43225830597995,20.9713528979499,0,11.0813570655421,4.2610302516126,0,0.445641827540694,3.24066498222321,0.664601683750863,0.270803863765016,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0,3.44898444241729,5.84166657320471,11.3858861408776,1.59282707162048,1.30216690771284,0,1.6563263098555,2.68771883424279,0,1.89421801635213,0.821127996921047,1.00803371612366,1.87208137048455,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56139988262505,5.17506179662842,1.02674429023799,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92859249633486,1.94142780736755,3.94891963872744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,3.0585488285695,0.569647187174163,1.66762242820452,3.29089818468955,1.29694662238543,1.62009431171434,0.79312517629427,0,0,0,1.85803175125719,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90709788827869,0,0,2.8309505256046,0,0,0,0,0.591860433821602,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,1.45963831372533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89176089707246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,5.95399226174341,0,14.8586970024693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30852315404675,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91350145737546,2.51385763096951,0.89947040332436,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0.217716747896961,0,7.67813404366298,0.286888821570705,0,0,0,0,0,0,0,0,0,3.62292828463847,1.60284246151616 | |||
|short_description=p3@CXCR5 | |||
}} |
Latest revision as of 01:27, 16 September 2015
Short description: | p3@CXCR5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CXCR5_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | 0bp_to_uc001pue.3_5end |
EntrezGene: | CXCR5 |
HGNC: | 1060 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 2.51e-20 | 15 |
haemolymphatic fluid | 2.51e-20 | 15 |
organism substance | 2.51e-20 | 15 |
connective tissue | 6.37e-07 | 371 |