FFCP PHASE1:Hg19::chr17:48277500..48277511,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1277 | |EntrezGene=1277 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2197 | |HGNC=2197 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENST00000507689_5end | |association_with_transcript=40bp_to_ENST00000507689_5end | ||
|cluster_id=chr17:48277500..48277511,- | |||
|description=CAGE_peak_56_at_COL1A1_5end | |description=CAGE_peak_56_at_COL1A1_5end | ||
|id=chr17:48277500..48277511,- | |id=chr17:48277500..48277511,- | ||
|ontology_enrichment_celltype=CL:0002603;4.22e-10;3!CL:0002575;4.82e-08;2!CL:0000349;8.27e-08;19!CL:0002195;1.46e-07;2!CL:0002571;1.46e-07;2!CL:0000128;1.86e-07;7!CL:0000126;1.86e-07;7!CL:0000127;1.86e-07;7 | |ontology_enrichment_celltype=CL:0000055!2.60e-22!180;CL:0000183!3.29e-08!59;CL:0000057!8.52e-08!75;CL:0000680!1.45e-07!57;CL:0000056!1.45e-07!57;CL:0000355!1.45e-07!57;CL:0000393!2.60e-07!60;CL:0000211!2.60e-07!60;CL:0000187!2.89e-07!54 | ||
| | |ontology_enrichment_celltype_v019=CL:0002603;4.22e-10;3!CL:0002575;4.82e-08;2!CL:0000349;8.27e-08;19!CL:0002195;1.46e-07;2!CL:0002571;1.46e-07;2!CL:0000128;1.86e-07;7!CL:0000126;1.86e-07;7!CL:0000127;1.86e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002603,3.51e-10,3;CL:0002575,4.45e-08,2;CL:0000349,9.98e-08,19;CL:0000128,1.52e-07,7;CL:0000126,1.52e-07,7;CL:0000127,1.52e-07,7;CL:0002453,1.52e-07,7;CL:0002195,1.90e-07,2;CL:0002571,1.90e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003104;5.53e-08;7!UBERON:0009142;5.53e-08;7 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!1.98e-09!11;UBERON:0006876!1.98e-09!11;UBERON:0001134!5.93e-08!61;UBERON:0002036!5.93e-08!61;UBERON:0003082!5.93e-08!61;UBERON:0002385!2.22e-07!63;UBERON:0001015!2.22e-07!63;UBERON:0000383!2.22e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;5.53e-08;7!UBERON:0009142;5.53e-08;7 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p56@COL1A1 | |short_description=p56@COL1A1 | ||
}} | }} |
Latest revision as of 01:31, 16 September 2015
Short description: | p56@COL1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_56_at_COL1A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_ENST00000507689_5end |
EntrezGene: | COL1A1 |
HGNC: | 2197 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 3.51e-10 | 3 |
central nervous system pericyte | 4.45e-08 | 2 |
extraembryonic cell | 9.98e-08 | 19 |
oligodendrocyte | 1.52e-07 | 7 |
macroglial cell | 1.52e-07 | 7 |
astrocyte | 1.52e-07 | 7 |
oligodendrocyte precursor cell | 1.52e-07 | 7 |
hepatic stem cell | 1.90e-07 | 2 |
hepatic mesenchymal stem cell | 1.90e-07 | 2 |