FFCP PHASE1:Hg19::chr10:104404775..104404890,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81603 | |EntrezGene=81603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15579 | |HGNC=15579 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=106bp_to_ENST00000462202_5end | |association_with_transcript=106bp_to_ENST00000462202_5end | ||
|cluster_id=chr10:104404775..104404890,+ | |||
|coexpression_cluster_id=C777 | |coexpression_cluster_id=C777 | ||
|description=CAGE_peak_2_at_TRIM8_5end | |description=CAGE_peak_2_at_TRIM8_5end | ||
|id=chr10:104404775..104404890,+ | |id=chr10:104404775..104404890,+ | ||
|ontology_enrichment_celltype=CL:0000838!2.12e-18!52;CL:0000542!6.00e-18!53;CL:0000051!6.00e-18!53;CL:0000738!3.34e-15!140;CL:0000791!8.92e-11!18;CL:0000789!8.92e-11!18;CL:0002420!8.92e-11!18;CL:0002419!8.92e-11!18;CL:0000790!8.92e-11!18;CL:0002087!1.83e-10!119;CL:0000945!7.63e-10!24;CL:0000826!7.63e-10!24;CL:0002031!2.16e-09!124;CL:0000037!9.65e-09!172;CL:0000566!9.65e-09!172;CL:0000236!2.00e-08!14;CL:0000084!2.56e-08!25;CL:0000827!2.56e-08!25;CL:0000988!1.04e-07!182;CL:0002032!3.04e-07!165;CL:0000837!3.04e-07!165;CL:0000625!3.38e-07!11 | |ontology_enrichment_celltype=CL:0000838!2.12e-18!52;CL:0000542!6.00e-18!53;CL:0000051!6.00e-18!53;CL:0000738!3.34e-15!140;CL:0000791!8.92e-11!18;CL:0000789!8.92e-11!18;CL:0002420!8.92e-11!18;CL:0002419!8.92e-11!18;CL:0000790!8.92e-11!18;CL:0002087!1.83e-10!119;CL:0000945!7.63e-10!24;CL:0000826!7.63e-10!24;CL:0002031!2.16e-09!124;CL:0000037!9.65e-09!172;CL:0000566!9.65e-09!172;CL:0000236!2.00e-08!14;CL:0000084!2.56e-08!25;CL:0000827!2.56e-08!25;CL:0000988!1.04e-07!182;CL:0002032!3.04e-07!165;CL:0000837!3.04e-07!165;CL:0000625!3.38e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000542;3.41e-11;53!CL:0000791;5.88e-11;18!CL:0000789;5.88e-11;18!CL:0002419;5.88e-11;18!CL:0000945;5.06e-10;24!CL:0000236;1.92e-08;13!CL:0000084;4.31e-08;25!CL:0000625;2.45e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.04e-18,52;CL:0000542,5.78e-18,53;CL:0000051,5.78e-18,53;CL:0000738,1.74e-15,136;CL:0000791,8.05e-11,18;CL:0000789,8.05e-11,18;CL:0002420,8.05e-11,18;CL:0002419,8.05e-11,18;CL:0000790,8.05e-11,18;CL:0002087,1.08e-10,115;CL:0000945,6.96e-10,24;CL:0000826,6.96e-10,24;CL:0002031,1.46e-09,120;CL:0000037,6.80e-09,168;CL:0000236,1.86e-08,14;CL:0000084,2.71e-08,25;CL:0000827,2.71e-08,25;CL:0000988,8.60e-08,177;CL:0002032,2.28e-07,161;CL:0000837,2.28e-07,161;CL:0000625,3.18e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;3.41e-11;53!CL:0000790;5.88e-11;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-20!115 | |ontology_enrichment_uberon=UBERON:0007023!1.74e-20!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.04e-20,114 | |||
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| ||
|short_description=p2@TRIM8 | |short_description=p2@TRIM8 | ||
}} | }} |
Latest revision as of 01:52, 16 September 2015
Short description: | p2@TRIM8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRIM8_5end |
Coexpression cluster: | C777_Neutrophils_Eosinophils_CD19_CD4_CD8_Whole_Natural |
Association with transcript: | 106bp_to_ENST00000462202_5end |
EntrezGene: | TRIM8 |
HGNC: | 15579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.04e-18 | 52 |
lymphocyte | 5.78e-18 | 53 |
common lymphoid progenitor | 5.78e-18 | 53 |
leukocyte | 1.74e-15 | 136 |
mature alpha-beta T cell | 8.05e-11 | 18 |
alpha-beta T cell | 8.05e-11 | 18 |
immature T cell | 8.05e-11 | 18 |
mature T cell | 8.05e-11 | 18 |
immature alpha-beta T cell | 8.05e-11 | 18 |
nongranular leukocyte | 1.08e-10 | 115 |
lymphocyte of B lineage | 6.96e-10 | 24 |
pro-B cell | 6.96e-10 | 24 |
hematopoietic lineage restricted progenitor cell | 1.46e-09 | 120 |
hematopoietic stem cell | 6.80e-09 | 168 |
B cell | 1.86e-08 | 14 |
T cell | 2.71e-08 | 25 |
pro-T cell | 2.71e-08 | 25 |
hematopoietic cell | 8.60e-08 | 177 |
hematopoietic oligopotent progenitor cell | 2.28e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.28e-07 | 161 |
CD8-positive, alpha-beta T cell | 3.18e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.04e-20 | 114 |