FFCP PHASE1:Hg19::chr7:1272472..1272480,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340260 | |EntrezGene=340260 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33194 | |HGNC=33194 | ||
|TSSclassifier=strong | |||
|UniProt=A6NJT0 | |UniProt=A6NJT0 | ||
|association_with_transcript=-62bp_to_ENST00000316333_5end | |association_with_transcript=-62bp_to_ENST00000316333_5end | ||
|cluster_id=chr7:1272472..1272480,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_3_at_UNCX_5end | |description=CAGE_peak_3_at_UNCX_5end | ||
|id=chr7:1272472..1272480,+ | |id=chr7:1272472..1272480,+ | ||
|ontology_enrichment_celltype=CL:0000242!1.48e-16!2;CL:0000312!3.89e-07!5;CL:0002319!6.00e-07!25 | |ontology_enrichment_celltype=CL:0000242!1.48e-16!2;CL:0000312!3.89e-07!5;CL:0002319!6.00e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000123;6.36e-57;2!CL:0000242;6.36e-57;2!CL:0000312;1.61e-23;5!CL:0000240;8.63e-20;6!CL:0000311;8.63e-20;6!CL:0000079;8.63e-20;6!CL:0000237;8.63e-20;6!CL:0000095;3.87e-14;17!CL:0000362;1.49e-13;9!CL:0002319;3.64e-10;25!CL:0002159;4.56e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.77e-57,2;CL:0000312,1.44e-23,5;CL:0000240,7.84e-20,6;CL:0000311,7.84e-20,6;CL:0000079,7.84e-20,6;CL:0000237,7.84e-20,6;CL:0000036,7.84e-20,6;CL:0000357,7.84e-20,6;CL:0000114,7.84e-20,6;CL:0000095,3.79e-14,17;CL:0000123,3.79e-14,17;CL:0000362,1.40e-13,9;CL:0002319,3.58e-10,25;CL:0002159,4.38e-09,14 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.21e-85;3!CL:0000357;8.63e-20;6!CL:0000114;8.63e-20;6!UBERON:0003056;7.78e-11;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!5.22e-31!15;UBERON:0003057!5.22e-31!15;UBERON:0004733!5.24e-30!12;UBERON:0002028!5.24e-30!12;UBERON:0007277!5.24e-30!12;UBERON:0004732!1.21e-27!13;UBERON:0002680!3.84e-21!9;UBERON:0001895!3.84e-21!9;UBERON:0010092!3.84e-21!9;UBERON:0002298!5.36e-15!8;UBERON:0001017!8.18e-15!82;UBERON:0005743!5.07e-14!86;UBERON:0000073!1.77e-12!94;UBERON:0001016!1.77e-12!94;UBERON:0002037!2.78e-12!6;UBERON:0006215!2.78e-12!6;UBERON:0002346!2.01e-11!90;UBERON:0001049!3.36e-11!57;UBERON:0005068!3.36e-11!57;UBERON:0006241!3.36e-11!57;UBERON:0007135!3.36e-11!57;UBERON:0000988!6.29e-11!3;UBERON:0000955!7.54e-11!69;UBERON:0006238!7.54e-11!69;UBERON:0001896!1.03e-10!3;UBERON:0005290!1.03e-10!3;UBERON:0010096!1.03e-10!3;UBERON:0003075!3.40e-10!86;UBERON:0007284!3.40e-10!86;UBERON:0000924!4.49e-09!173;UBERON:0006601!4.49e-09!173;UBERON:0002616!1.08e-08!59;UBERON:0002336!2.06e-08!1;UBERON:0001018!2.06e-08!1;UBERON:0002473!2.06e-08!1;UBERON:0005340!2.06e-08!1;UBERON:0002316!2.06e-08!1;UBERON:0003544!2.06e-08!1;UBERON:0001020!2.06e-08!1;UBERON:0005970!2.06e-08!1;UBERON:0002437!2.06e-08!1;UBERON:0004121!3.85e-08!169 | |ontology_enrichment_uberon=UBERON:0003076!5.22e-31!15;UBERON:0003057!5.22e-31!15;UBERON:0004733!5.24e-30!12;UBERON:0002028!5.24e-30!12;UBERON:0007277!5.24e-30!12;UBERON:0004732!1.21e-27!13;UBERON:0002680!3.84e-21!9;UBERON:0001895!3.84e-21!9;UBERON:0010092!3.84e-21!9;UBERON:0002298!5.36e-15!8;UBERON:0001017!8.18e-15!82;UBERON:0005743!5.07e-14!86;UBERON:0000073!1.77e-12!94;UBERON:0001016!1.77e-12!94;UBERON:0002037!2.78e-12!6;UBERON:0006215!2.78e-12!6;UBERON:0002346!2.01e-11!90;UBERON:0001049!3.36e-11!57;UBERON:0005068!3.36e-11!57;UBERON:0006241!3.36e-11!57;UBERON:0007135!3.36e-11!57;UBERON:0000988!6.29e-11!3;UBERON:0000955!7.54e-11!69;UBERON:0006238!7.54e-11!69;UBERON:0001896!1.03e-10!3;UBERON:0005290!1.03e-10!3;UBERON:0010096!1.03e-10!3;UBERON:0003075!3.40e-10!86;UBERON:0007284!3.40e-10!86;UBERON:0000924!4.49e-09!173;UBERON:0006601!4.49e-09!173;UBERON:0002616!1.08e-08!59;UBERON:0002336!2.06e-08!1;UBERON:0001018!2.06e-08!1;UBERON:0002473!2.06e-08!1;UBERON:0005340!2.06e-08!1;UBERON:0002316!2.06e-08!1;UBERON:0003544!2.06e-08!1;UBERON:0001020!2.06e-08!1;UBERON:0005970!2.06e-08!1;UBERON:0002437!2.06e-08!1;UBERON:0004121!3.85e-08!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;5.61e-43;6!UBERON:0002680;5.63e-29;9!UBERON:0001895;5.63e-29;9!UBERON:0004733;5.89e-22;12!UBERON:0002028;5.89e-22;12!UBERON:0004732;2.47e-20;13!UBERON:0001003;1.59e-08;15!UBERON:0007376;1.59e-08;15!UBERON:0000966;5.23e-07;5!UBERON:0005388;5.23e-07;5!UBERON:0001802;5.23e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.62e-43,6;UBERON:0006215,5.62e-43,6;UBERON:0002680,5.64e-29,9;UBERON:0001895,5.64e-29,9;UBERON:0010092,5.64e-29,9;UBERON:0004733,5.89e-22,12;UBERON:0002028,5.89e-22,12;UBERON:0007277,5.89e-22,12;UBERON:0004732,2.47e-20,13;UBERON:0003076,9.83e-18,15;UBERON:0003057,9.83e-18,15;UBERON:0010371,5.80e-10,104;UBERON:0001003,1.53e-08,15;UBERON:0007376,1.53e-08,15;UBERON:0007383,1.53e-08,15;UBERON:0000955,5.75e-07,68;UBERON:0006238,5.75e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0,0,0,3.05163472634166,6.52417633594225,3.25102380848902,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.124192805882767,0.553394539744923,0,0,0,0,1.87333962322753,4.34763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.475788130837822,0,0,0,0,0,0,0,0,0,0,4.10835390505089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.473314686579554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0,0,0,3.05163472634166,6.52417633594225,3.25102380848902,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.124192805882767,0.553394539744923,0,0,0,0,1.87333962322753,4.34763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.475788130837822,0,0,0,0,0,0,0,0,0,0,4.10835390505089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.473314686579554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@UNCX | |short_description=p3@UNCX | ||
}} | }} |
Latest revision as of 02:23, 16 September 2015
Short description: | p3@UNCX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UNCX_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -62bp_to_ENST00000316333_5end |
EntrezGene: | UNCX |
HGNC: | 33194 |
UniProt: | A6NJT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.77e-57 | 2 |
keratinocyte | 1.44e-23 | 5 |
stratified squamous epithelial cell | 7.84e-20 | 6 |
keratin accumulating cell | 7.84e-20 | 6 |
stratified epithelial cell | 7.84e-20 | 6 |
keratinizing barrier epithelial cell | 7.84e-20 | 6 |
epithelial fate stem cell | 7.84e-20 | 6 |
stratified epithelial stem cell | 7.84e-20 | 6 |
surface ectodermal cell | 7.84e-20 | 6 |
neuron associated cell | 3.79e-14 | 17 |
neuron associated cell (sensu Vertebrata) | 3.79e-14 | 17 |
epidermal cell | 1.40e-13 | 9 |
neural cell | 3.58e-10 | 25 |
general ecto-epithelial cell | 4.38e-09 | 14 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.62e-43 | 6 |
rhombic lip | 5.62e-43 | 6 |
regional part of metencephalon | 5.64e-29 | 9 |
metencephalon | 5.64e-29 | 9 |
future metencephalon | 5.64e-29 | 9 |
segmental subdivision of hindbrain | 5.89e-22 | 12 |
hindbrain | 5.89e-22 | 12 |
presumptive hindbrain | 5.89e-22 | 12 |
segmental subdivision of nervous system | 2.47e-20 | 13 |
posterior neural tube | 9.83e-18 | 15 |
chordal neural plate | 9.83e-18 | 15 |
ecto-epithelium | 5.80e-10 | 104 |
skin epidermis | 1.53e-08 | 15 |
outer epithelium | 1.53e-08 | 15 |
enveloping layer of ectoderm | 1.53e-08 | 15 |
brain | 5.75e-07 | 68 |
future brain | 5.75e-07 | 68 |