FFCP PHASE1:Hg19::chr12:106641728..106641805,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10970 | |EntrezGene=10970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16991 | |HGNC=16991 | ||
|TSSclassifier=strong | |||
|UniProt=Q07065 | |UniProt=Q07065 | ||
|association_with_transcript=0bp_to_ENST00000378026_5end | |association_with_transcript=0bp_to_ENST00000378026_5end | ||
|cluster_id=chr12:106641728..106641805,- | |||
|coexpression_cluster_id=C2181 | |||
|description=CAGE_peak_1_at_CKAP4_5end | |description=CAGE_peak_1_at_CKAP4_5end | ||
|id=chr12:106641728..106641805,- | |id=chr12:106641728..106641805,- | ||
|ontology_enrichment_celltype=CL:0000055!1.37e-37!180;CL:0000222!1.17e-27!119;CL:0000548!1.60e-24!679;CL:0000004!1.60e-24!679;CL:0000255!1.60e-24!679;CL:0000144!5.02e-24!625;CL:0000012!3.40e-23!682;CL:0002371!1.78e-22!591;CL:0000183!3.48e-22!59;CL:0000680!4.76e-22!57;CL:0000056!4.76e-22!57;CL:0000355!4.76e-22!57;CL:0000220!1.12e-21!246;CL:0000192!3.25e-21!42;CL:0000514!3.25e-21!42;CL:0002321!3.39e-21!248;CL:0000187!3.91e-21!54;CL:0000057!1.32e-20!75;CL:0000359!1.01e-17!32;CL:0000393!1.06e-17!60;CL:0000211!1.06e-17!60;CL:0000003!2.27e-11!722;CL:0000048!5.89e-09!430;CL:0000723!8.14e-09!436;CL:0000034!9.82e-08!444;CL:0000213!1.03e-07!57;CL:0000215!1.03e-07!57;CL:0002334!5.91e-07!12;CL:0002620!7.69e-07!23 | |ontology_enrichment_celltype=CL:0000055!1.37e-37!180;CL:0000222!1.17e-27!119;CL:0000548!1.60e-24!679;CL:0000004!1.60e-24!679;CL:0000255!1.60e-24!679;CL:0000144!5.02e-24!625;CL:0000012!3.40e-23!682;CL:0002371!1.78e-22!591;CL:0000183!3.48e-22!59;CL:0000680!4.76e-22!57;CL:0000056!4.76e-22!57;CL:0000355!4.76e-22!57;CL:0000220!1.12e-21!246;CL:0000192!3.25e-21!42;CL:0000514!3.25e-21!42;CL:0002321!3.39e-21!248;CL:0000187!3.91e-21!54;CL:0000057!1.32e-20!75;CL:0000359!1.01e-17!32;CL:0000393!1.06e-17!60;CL:0000211!1.06e-17!60;CL:0000003!2.27e-11!722;CL:0000048!5.89e-09!430;CL:0000723!8.14e-09!436;CL:0000034!9.82e-08!444;CL:0000213!1.03e-07!57;CL:0000215!1.03e-07!57;CL:0002334!5.91e-07!12;CL:0002620!7.69e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.27e-16;32!CL:0000192;4.93e-15;43!CL:0000187;2.47e-11;55!CL:0000393;7.06e-09;61!CL:0000211;7.06e-09;61!CL:0000057;9.22e-09;73!CL:0000134;4.60e-08;55!CL:0002334;5.92e-07;12!CL:0002320;6.38e-07;188!CL:0002620;7.67e-07;23!CL:0000048;8.21e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.05e-28,121;CL:0000680,6.63e-22,58;CL:0000056,6.63e-22,58;CL:0000355,6.63e-22,58;CL:0002321,1.37e-21,250;CL:0000057,3.45e-21,76;CL:0000192,5.46e-21,43;CL:0000514,5.46e-21,43;CL:0000187,5.49e-21,55;CL:0000359,1.01e-17,32;CL:0000393,1.29e-17,61;CL:0000211,1.29e-17,61;CL:0000048,3.30e-09,427;CL:0000723,4.60e-09,433;CL:0000213,5.15e-08,58;CL:0000215,5.15e-08,58;CL:0000034,5.81e-08,441;CL:0002334,5.91e-07,12;CL:0002620,7.69e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;4.93e-15;43!CL:0000355;2.34e-11;58!CL:0000222;1.31e-07;121 | |||
|ontology_enrichment_disease=DOID:2394!5.68e-07!14 | |ontology_enrichment_disease=DOID:2394!5.68e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.71e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.68e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.31e-23!79;UBERON:0007798!2.31e-23!79;UBERON:0000486!5.31e-22!82;UBERON:0000914!6.48e-22!83;UBERON:0002329!6.48e-22!83;UBERON:0003077!6.48e-22!83;UBERON:0003059!6.48e-22!83;UBERON:0007282!6.48e-22!83;UBERON:0009618!6.48e-22!83;UBERON:0007285!6.48e-22!83;UBERON:0000055!7.38e-22!69;UBERON:0004872!2.56e-21!84;UBERON:0004290!3.14e-21!70;UBERON:0005256!6.49e-21!143;UBERON:0003914!7.74e-21!118;UBERON:0001637!8.58e-21!42;UBERON:0003509!8.58e-21!42;UBERON:0004572!8.58e-21!42;UBERON:0001981!1.34e-20!60;UBERON:0007500!1.34e-20!60;UBERON:0004537!1.34e-20!60;UBERON:0006965!1.34e-20!60;UBERON:0001134!8.98e-20!61;UBERON:0002036!8.98e-20!61;UBERON:0003082!8.98e-20!61;UBERON:0000490!1.91e-19!138;UBERON:0000926!4.74e-19!448;UBERON:0004120!4.74e-19!448;UBERON:0006603!4.74e-19!448;UBERON:0004535!5.43e-19!110;UBERON:0002385!1.86e-18!63;UBERON:0001015!1.86e-18!63;UBERON:0000383!1.86e-18!63;UBERON:0001009!2.40e-18!113;UBERON:0004573!1.30e-16!33;UBERON:0004571!1.30e-16!33;UBERON:0002100!2.21e-16!216;UBERON:0000468!7.26e-16!659;UBERON:0000480!2.88e-14!626;UBERON:0000467!7.64e-14!625;UBERON:0003104!1.02e-12!238;UBERON:0009142!1.02e-12!238;UBERON:0003102!9.10e-10!95;UBERON:0002050!1.73e-09!605;UBERON:0005423!1.73e-09!605;UBERON:0000923!2.07e-09!604;UBERON:0005291!2.07e-09!604;UBERON:0006598!2.07e-09!604;UBERON:0002532!2.07e-09!604;UBERON:0002204!2.12e-09!167;UBERON:0000947!3.09e-09!21;UBERON:0010191!3.09e-09!21;UBERON:0003081!3.49e-09!216;UBERON:0000922!4.82e-09!612;UBERON:0000475!9.17e-09!365;UBERON:0000119!9.61e-08!312;UBERON:0000483!1.48e-07!309;UBERON:0002199!4.97e-07!45;UBERON:0002416!4.97e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.25e-15;42!UBERON:0003509;3.25e-15;42!UBERON:0004572;3.25e-15;42!UBERON:0004573;4.09e-15;33!UBERON:0004571;4.09e-15;33!UBERON:0007500;5.62e-12;56!UBERON:0001981;5.62e-12;56!UBERON:0004537;5.62e-12;56!UBERON:0000055;1.71e-10;65!UBERON:0002049;9.28e-10;75!UBERON:0007798;9.28e-10;75!UBERON:0003914;1.64e-09;74!UBERON:0000947;3.15e-09;21!UBERON:0010191;3.15e-09;21 | |||
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| ||
|short_description=p1@CKAP4 | |short_description=p1@CKAP4 | ||
}} | }} |
Latest revision as of 02:28, 16 September 2015
Short description: | p1@CKAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CKAP4_5end |
Coexpression cluster: | C2181_Smooth_Fibroblast_leiomyoma_mesenchymal_hepatic_normal_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000378026_5end |
EntrezGene: | CKAP4 |
HGNC: | 16991 |
UniProt: | Q07065 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.05e-28 | 121 |
muscle precursor cell | 6.63e-22 | 58 |
myoblast | 6.63e-22 | 58 |
multi-potent skeletal muscle stem cell | 6.63e-22 | 58 |
embryonic cell | 1.37e-21 | 250 |
fibroblast | 3.45e-21 | 76 |
smooth muscle cell | 5.46e-21 | 43 |
smooth muscle myoblast | 5.46e-21 | 43 |
muscle cell | 5.49e-21 | 55 |
vascular associated smooth muscle cell | 1.01e-17 | 32 |
electrically responsive cell | 1.29e-17 | 61 |
electrically active cell | 1.29e-17 | 61 |
multi fate stem cell | 3.30e-09 | 427 |
somatic stem cell | 4.60e-09 | 433 |
lining cell | 5.15e-08 | 58 |
barrier cell | 5.15e-08 | 58 |
stem cell | 5.81e-08 | 441 |
preadipocyte | 5.91e-07 | 12 |
skin fibroblast | 7.69e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.68e-07 | 14 |