FFCP PHASE1:Hg19::chr4:152147524..152147578,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152503 | |EntrezGene=152503 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30418 | |HGNC=30418 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_ENST00000474743_5end | |association_with_transcript=26bp_to_ENST00000474743_5end | ||
|cluster_id=chr4:152147524..152147578,- | |||
|description=CAGE_peak_2_at_SH3D19_5end | |description=CAGE_peak_2_at_SH3D19_5end | ||
|id=chr4:152147524..152147578,- | |id=chr4:152147524..152147578,- | ||
|ontology_enrichment_celltype=CL:0000055!1.35e-36!180;CL:0000057!1.91e-26!75;CL:0000680!3.46e-19!57;CL:0000056!3.46e-19!57;CL:0000355!3.46e-19!57;CL:0000187!6.34e-18!54;CL:0000222!8.74e-18!119;CL:0000183!1.14e-16!59;CL:0000393!1.18e-14!60;CL:0000211!1.18e-14!60;CL:0000192!9.36e-14!42;CL:0000514!9.36e-14!42;CL:0000359!1.95e-10!32;CL:0000220!7.26e-09!246;CL:0000136!1.28e-08!15;CL:0002334!1.39e-08!12;CL:0002620!1.52e-08!23;CL:0002321!1.99e-08!248;CL:0002371!1.84e-07!591 | |ontology_enrichment_celltype=CL:0000055!1.35e-36!180;CL:0000057!1.91e-26!75;CL:0000680!3.46e-19!57;CL:0000056!3.46e-19!57;CL:0000355!3.46e-19!57;CL:0000187!6.34e-18!54;CL:0000222!8.74e-18!119;CL:0000183!1.14e-16!59;CL:0000393!1.18e-14!60;CL:0000211!1.18e-14!60;CL:0000192!9.36e-14!42;CL:0000514!9.36e-14!42;CL:0000359!1.95e-10!32;CL:0000220!7.26e-09!246;CL:0000136!1.28e-08!15;CL:0002334!1.39e-08!12;CL:0002620!1.52e-08!23;CL:0002321!1.99e-08!248;CL:0002371!1.84e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000057;2.69e-11;73!CL:0000187;4.99e-11;55!CL:0000192;5.79e-11;43!CL:0000359;1.91e-10;32!CL:0002334;5.51e-09;12!CL:0002620;6.12e-09;23!CL:0000134;7.32e-09;55!CL:0000723;1.35e-08;61!CL:0000393;3.11e-08;61!CL:0000211;3.11e-08;61!CL:0000048;3.38e-08;58!CL:0002320;5.05e-08;188!CL:0000136;1.10e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.01e-28,76;CL:0000680,9.20e-21,58;CL:0000056,9.20e-21,58;CL:0000355,9.20e-21,58;CL:0000187,2.02e-19,55;CL:0000222,3.43e-18,121;CL:0000393,4.24e-15,61;CL:0000211,4.24e-15,61;CL:0000192,5.34e-15,43;CL:0000514,5.34e-15,43;CL:0000359,6.08e-11,32;CL:0000136,5.07e-09,15;CL:0002334,5.50e-09,12;CL:0002620,6.07e-09,23;CL:0000048,1.47e-08,427;CL:0000723,2.60e-08,433;CL:0000034,4.03e-07,441;CL:0002321,8.60e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000355;3.18e-11;58!CL:0000514;5.79e-11;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002385;4.69e-11;31!UBERON:0001015;4.69e-11;31!UBERON:0000383;4.69e-11;31!UBERON:0004573;4.60e-10;33!UBERON:0004571;4.60e-10;33!UBERON:0001637;4.37e-09;42!UBERON:0003509;4.37e-09;42!UBERON:0004572;4.37e-09;42!UBERON:0002384;1.22e-08;198!UBERON:0002204;1.41e-08;70!UBERON:0000075;1.73e-08;16!UBERON:0001013;1.82e-08;14!UBERON:0000947;5.66e-08;21!UBERON:0010191;5.66e-08;21!UBERON:0007500;7.46e-08;56!UBERON:0001981;7.46e-08;56!UBERON:0004537;7.46e-08;56!UBERON:0002049;7.48e-08;75!UBERON:0007798;7.48e-08;75!UBERON:0000055;1.07e-07;65!UBERON:0001135;4.94e-07;15!UBERON:0002199;8.36e-07;46!UBERON:0002416;8.36e-07;46 | |||
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| ||
|short_description=p2@SH3D19 | |short_description=p2@SH3D19 | ||
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Latest revision as of 02:33, 16 September 2015
Short description: | p2@SH3D19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SH3D19_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000474743_5end |
EntrezGene: | SH3D19 |
HGNC: | 30418 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.01e-28 | 76 |
muscle precursor cell | 9.20e-21 | 58 |
myoblast | 9.20e-21 | 58 |
multi-potent skeletal muscle stem cell | 9.20e-21 | 58 |
muscle cell | 2.02e-19 | 55 |
mesodermal cell | 3.43e-18 | 121 |
electrically responsive cell | 4.24e-15 | 61 |
electrically active cell | 4.24e-15 | 61 |
smooth muscle cell | 5.34e-15 | 43 |
smooth muscle myoblast | 5.34e-15 | 43 |
vascular associated smooth muscle cell | 6.08e-11 | 32 |
fat cell | 5.07e-09 | 15 |
preadipocyte | 5.50e-09 | 12 |
skin fibroblast | 6.07e-09 | 23 |
multi fate stem cell | 1.47e-08 | 427 |
somatic stem cell | 2.60e-08 | 433 |
stem cell | 4.03e-07 | 441 |
embryonic cell | 8.60e-07 | 250 |