FFCP PHASE1:Hg19::chr4:152149033..152149117,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152503 | |EntrezGene=152503 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30418 | |HGNC=30418 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000514013_5end | |association_with_transcript=0bp_to_ENST00000514013_5end | ||
|cluster_id=chr4:152149033..152149117,- | |||
|coexpression_cluster_id=C2779 | |||
|description=CAGE_peak_1_at_SH3D19_5end | |description=CAGE_peak_1_at_SH3D19_5end | ||
|id=chr4:152149033..152149117,- | |id=chr4:152149033..152149117,- | ||
|ontology_enrichment_celltype=CL:0000055!6.06e-15!180;CL:0000057!4.34e-14!75;CL:0000222!4.70e-12!119;CL:0000136!2.51e-11!15;CL:0000680!3.34e-10!57;CL:0000056!3.34e-10!57;CL:0000355!3.34e-10!57;CL:0000183!1.39e-09!59;CL:0000187!1.53e-09!54;CL:0002139!2.00e-08!24;CL:0000393!9.33e-07!60;CL:0000211!9.33e-07!60 | |ontology_enrichment_celltype=CL:0000055!6.06e-15!180;CL:0000057!4.34e-14!75;CL:0000222!4.70e-12!119;CL:0000136!2.51e-11!15;CL:0000680!3.34e-10!57;CL:0000056!3.34e-10!57;CL:0000355!3.34e-10!57;CL:0000183!1.39e-09!59;CL:0000187!1.53e-09!54;CL:0002139!2.00e-08!24;CL:0000393!9.33e-07!60;CL:0000211!9.33e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000136;7.27e-11;13!CL:0002139;8.45e-09;24!CL:0000071;5.29e-07;18!CL:0002334;9.31e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.18e-14,76;CL:0000136,7.77e-12,15;CL:0000222,9.99e-12,121;CL:0000680,6.19e-11,58;CL:0000056,6.19e-11,58;CL:0000355,6.19e-11,58;CL:0000187,3.09e-10,55;CL:0002139,8.74e-09,24;CL:0000393,1.48e-07,61;CL:0000211,1.48e-07,61;CL:0000192,4.02e-07,43;CL:0000514,4.02e-07,43;CL:0000071,5.51e-07,18;CL:0002546,5.51e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;5.29e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001013;2.26e-08;14!UBERON:0002385;1.17e-07;31!UBERON:0001015;1.17e-07;31!UBERON:0000383;1.17e-07;31!UBERON:0004573;1.99e-07;33!UBERON:0004571;1.99e-07;33!UBERON:0000947;5.12e-07;21!UBERON:0010191;5.12e-07;21!UBERON:0004638;5.29e-07;18!UBERON:0001986;5.29e-07;18!UBERON:0004852;5.29e-07;18!UBERON:0000055;6.72e-07;65!UBERON:0007500;8.02e-07;56!UBERON:0001981;8.02e-07;56!UBERON:0004537;8.02e-07;56 | |||
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| ||
|short_description=p1@SH3D19 | |short_description=p1@SH3D19 | ||
}} | }} |
Latest revision as of 02:37, 16 September 2015
Short description: | p1@SH3D19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SH3D19_5end |
Coexpression cluster: | C2779_Adipocyte_mature_adipose_Preadipocyte_Fibroblast_Mesenchymal_Hair |
Association with transcript: | 0bp_to_ENST00000514013_5end |
EntrezGene: | SH3D19 |
HGNC: | 30418 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.18e-14 | 76 |
fat cell | 7.77e-12 | 15 |
mesodermal cell | 9.99e-12 | 121 |
muscle precursor cell | 6.19e-11 | 58 |
myoblast | 6.19e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.19e-11 | 58 |
muscle cell | 3.09e-10 | 55 |
endothelial cell of vascular tree | 8.74e-09 | 24 |
electrically responsive cell | 1.48e-07 | 61 |
electrically active cell | 1.48e-07 | 61 |
smooth muscle cell | 4.02e-07 | 43 |
smooth muscle myoblast | 4.02e-07 | 43 |
blood vessel endothelial cell | 5.51e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.51e-07 | 18 |