FFCP PHASE1:Hg19::chr1:111742738..111742772,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79961 | |EntrezGene=79961 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26192 | |HGNC=26192 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000477586_5end | |association_with_transcript=0bp_to_ENST00000477586_5end | ||
|cluster_id=chr1:111742738..111742772,- | |||
|coexpression_cluster_id=C1017 | |coexpression_cluster_id=C1017 | ||
|description=CAGE_peak_4_at_DENND2D_5end | |description=CAGE_peak_4_at_DENND2D_5end | ||
|id=chr1:111742738..111742772,- | |id=chr1:111742738..111742772,- | ||
|ontology_enrichment_celltype=CL:0000738!1.88e-56!140;CL:0002031!5.07e-53!124;CL:0000037!7.46e-52!172;CL:0000566!7.46e-52!172;CL:0002032!4.24e-51!165;CL:0000837!4.24e-51!165;CL:0002087!3.73e-49!119;CL:0000988!1.83e-46!182;CL:0000766!2.11e-46!76;CL:0000557!7.16e-43!71;CL:0000839!2.68e-42!70;CL:0002009!3.24e-39!65;CL:0000763!1.02e-38!112;CL:0000049!1.02e-38!112;CL:0002194!2.13e-38!63;CL:0000576!2.13e-38!63;CL:0000040!2.13e-38!63;CL:0000559!2.13e-38!63;CL:0002057!1.23e-34!42;CL:0000860!2.85e-32!45;CL:0000838!2.26e-11!52;CL:0000542!6.06e-11!53;CL:0000051!6.06e-11!53;CL:0000134!5.93e-08!358;CL:0002393!1.21e-07!9;CL:0002397!1.21e-07!9;CL:0000084!1.56e-07!25;CL:0000827!1.56e-07!25;CL:0000791!2.16e-07!18;CL:0000789!2.16e-07!18;CL:0002420!2.16e-07!18;CL:0002419!2.16e-07!18;CL:0000790!2.16e-07!18;CL:0002320!3.23e-07!365 | |ontology_enrichment_celltype=CL:0000738!1.88e-56!140;CL:0002031!5.07e-53!124;CL:0000037!7.46e-52!172;CL:0000566!7.46e-52!172;CL:0002032!4.24e-51!165;CL:0000837!4.24e-51!165;CL:0002087!3.73e-49!119;CL:0000988!1.83e-46!182;CL:0000766!2.11e-46!76;CL:0000557!7.16e-43!71;CL:0000839!2.68e-42!70;CL:0002009!3.24e-39!65;CL:0000763!1.02e-38!112;CL:0000049!1.02e-38!112;CL:0002194!2.13e-38!63;CL:0000576!2.13e-38!63;CL:0000040!2.13e-38!63;CL:0000559!2.13e-38!63;CL:0002057!1.23e-34!42;CL:0000860!2.85e-32!45;CL:0000838!2.26e-11!52;CL:0000542!6.06e-11!53;CL:0000051!6.06e-11!53;CL:0000134!5.93e-08!358;CL:0002393!1.21e-07!9;CL:0002397!1.21e-07!9;CL:0000084!1.56e-07!25;CL:0000827!1.56e-07!25;CL:0000791!2.16e-07!18;CL:0000789!2.16e-07!18;CL:0002420!2.16e-07!18;CL:0002419!2.16e-07!18;CL:0000790!2.16e-07!18;CL:0002320!3.23e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.04e-39;39!CL:0000234;2.04e-39;39!CL:0000860;5.26e-38;33!CL:0002057;5.26e-38;33!CL:0000576;1.89e-33;48!CL:0000766;3.13e-29;69!CL:0002087;1.66e-16;104!CL:0000738;4.15e-15;136!CL:0000763;3.39e-14;100!CL:0000235;4.42e-11;6!CL:0000988;9.77e-09;177!CL:0000097;1.38e-08;5!CL:0002393;2.68e-08;6!CL:0002397;2.68e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.85e-71,72;CL:0000839,1.52e-66,66;CL:0000557,2.91e-65,67;CL:0000738,2.06e-63,136;CL:0002031,3.31e-62,120;CL:0002194,7.75e-62,59;CL:0000576,7.75e-62,59;CL:0000040,7.75e-62,59;CL:0000559,7.75e-62,59;CL:0000473,3.80e-61,48;CL:0000234,3.80e-61,48;CL:0002009,3.12e-59,61;CL:0002087,3.48e-59,115;CL:0000860,2.43e-51,42;CL:0002057,2.43e-51,42;CL:0002032,1.19e-50,161;CL:0000837,1.19e-50,161;CL:0000037,3.17e-50,168;CL:0000988,2.74e-46,177;CL:0000763,8.23e-45,108;CL:0000049,8.23e-45,108;CL:0000134,1.68e-11,354;CL:0000235,4.48e-11,6;CL:0002393,4.74e-11,9;CL:0002397,4.74e-11,9;CL:0002320,7.81e-11,361;CL:0000219,1.95e-09,386;CL:0000097,1.40e-08,5;CL:0002028,1.40e-08,5;CL:0000838,2.25e-07,52;CL:0000542,3.92e-07,53;CL:0000051,3.92e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;7.90e-38;42!CL:0000049;8.85e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.38e-44!102;UBERON:0003061!1.38e-44!102;UBERON:0002193!1.66e-40!112;UBERON:0002371!4.60e-35!80;UBERON:0001474!8.18e-31!86;UBERON:0002405!1.13e-28!115;UBERON:0004765!1.48e-22!101;UBERON:0001434!1.48e-22!101;UBERON:0007023!3.14e-18!115;UBERON:0003081!6.09e-11!216;UBERON:0002204!7.24e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!1.38e-44!102;UBERON:0003061!1.38e-44!102;UBERON:0002193!1.66e-40!112;UBERON:0002371!4.60e-35!80;UBERON:0001474!8.18e-31!86;UBERON:0002405!1.13e-28!115;UBERON:0004765!1.48e-22!101;UBERON:0001434!1.48e-22!101;UBERON:0007023!3.14e-18!115;UBERON:0003081!6.09e-11!216;UBERON:0002204!7.24e-08!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0004177;3.51e-07;5!UBERON:0005057;3.51e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.90e-66,98;UBERON:0003061,2.90e-66,98;UBERON:0002193,5.94e-62,108;UBERON:0002405,9.62e-57,93;UBERON:0002371,3.01e-55,76;UBERON:0001474,8.56e-50,82;UBERON:0004765,1.16e-43,90;UBERON:0001434,2.17e-37,100;UBERON:0003081,1.70e-23,203;UBERON:0002204,6.22e-16,167;UBERON:0002384,1.85e-10,371;UBERON:0000926,3.97e-09,315;UBERON:0004120,3.97e-09,315;UBERON:0006603,3.97e-09,315;UBERON:0004177,3.41e-07,7;UBERON:0005057,3.41e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,27.1267590405227,24.7943780138836,18.4183228274009,1.57345710739562,3.45446458287491,2.63187409637329,0,0,0,0,0.284338464974843,0,3.32397245119126,3.00816671205213,2.38711957787437,68.9659660658967,72.2282875222324,75.4696413168167,6.54292074508041,16.6265415223076,2.66842467306598,28.8212005763049,43.5837961303135,32.5191689439859,13.8092348314632,21.5174993484445,14.1889337933151,31.3718569470323,34.2106882299428,25.7310324529249,14.306417805238,22.1053981546855,11.9103446755895,10.4068523406107,25.0324641119353,7.03270838378945,3.95821560224059,10.7710375115681,4.68847225585964,22.0559021357724,32.9083430320861,8.71951148593805,25.8786125214446,30.7674921867919,27.3657944328447,13.9241885605675,43.8250386825202,15.5066569846033,4.01385043992689,3.82687739937078,3.56419697364239,1.68492946719743,0,0.964353520182481,1.99508920618874,1.59133341759272,2.37463399894024,0,0.546138611262131,0,1.70692089026603,0.800791974072025,0,0.661044872784862,0.954053754535364,0,0,0.382273228125229,0,2.80254281490768,0.526768169550154,0,0,0.411202997999018,2.84217042164153,1.30368906653436,0,0,5.57052284425868,0.883817722424512,0.443067789167242,1.35401931882508,1.79327847615945,2.08094956095805,7.5641436117691,14.3702009248641,14.4901542867526,0.889719378972363,0.267540828089713,1.04535523804977,3.62589896632212,0.383220493601921,1.03088233644789,2.27717722817553,1.59282707162048,3.90650072313851,0.950452044448374,2.71035214339991,5.37543766848557,0,3.07810427657222,2.46338399076314,2.01606743224732,1.06976078313403,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,1.30979075497713,0,0,19.7973910129357,14.975157407737,19.0129883541977,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.0425801383433,50.7789255352146,30.3207571069006,0,0,0,0,0,0,22.6625089432134,44.9047013467453,11.6103744702832,6.19715799692934,8.2057581727147,0.253991577168676,0.381988425558278,4.68869788840188,0,0,0.901029173531752,2.00078502841405,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.7845610308286,40.1805673145701,42.1667878966063,0,0,0,0,0,0,8.85472637548865,2.75843064282698,1.94064817373566,2.69520376187472,0,0,0,0.502548796003046,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,2.37285620900479,2.98837161849644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,3.91555844261345,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,4.9896214411693,0,0,0.443430153536676,0.229723400206959,3.04468565539302,1.52927441428475,2.84823593587081,5.71756261098694,5.75907182320672,3.24236655596359,2.70015718619057,0.79312517629427,0,0,0,0,0,0.355709216742071,0,0.399158742865633,0.191505370132367,1.05836791361941,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0.671028323677248,0,3.32159762183469,0,0,0,0,0,0,6.73937624650712,0,0,0,0.23874448473769,0,0,0.994147647766298,0,0,0.988823245360557,0,0.796991953004279,2.76283915531148,0,0.102268682502155,0.492339221844278,0,0,0,1.53471711068062,0.789147245095469,0,0,1.93866549219044,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.307801034015188,0,0,0,0.108647371922008,0,0.457987967009312,1.06606955203727,3.06579894587209,0.627921025580099,0,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0,2.98578579323551,1.06149077404007,0.611030144933625,0,0,0,0.606610196826093,0,0,0,0,0,0,0,0.30607276163049,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0.0730893170861856,0,1.06687918137261,0,0.225980740780532,0,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.446342914883745,0,0,0,0,0,0,0,6.18115324080227,0,0.544813624446302,0,0,0,0.449947783103001,0.77380195455795,0.0607495566580247,0,0.945668487590378,0.472091293214983,0,0,0,2.1440859791201,0,0,0,0,0,0,0.164185041498678,0,0,1.02586563574658,0,0.258565912723101,0.39669780522807,0,0,6.0868825163586,0.157204305099666,5.79934677486074,5.95399226174341,0,0,0,0,0.2506898940227,0.612691153526923,0,0,1.77213635993397,0,0.250381861413,0,0.332787154610557,0.620964029413834,0,0,0.454947352624943,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0,1.59989916683944,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,1.5794168953344,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| ||
|short_description=p4@DENND2D | |short_description=p4@DENND2D | ||
}} | }} |
Latest revision as of 02:42, 16 September 2015
Short description: | p4@DENND2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DENND2D_5end |
Coexpression cluster: | C1017_CD14_Macrophage_Monocytederived_Mast_Dendritic_B_splenic |
Association with transcript: | 0bp_to_ENST00000477586_5end |
EntrezGene: | DENND2D |
HGNC: | 26192 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.90e-66 | 98 |
blood island | 2.90e-66 | 98 |
hemolymphoid system | 5.94e-62 | 108 |
immune system | 9.62e-57 | 93 |
bone marrow | 3.01e-55 | 76 |
bone element | 8.56e-50 | 82 |
skeletal element | 1.16e-43 | 90 |
skeletal system | 2.17e-37 | 100 |
lateral plate mesoderm | 1.70e-23 | 203 |
musculoskeletal system | 6.22e-16 | 167 |
connective tissue | 1.85e-10 | 371 |
mesoderm | 3.97e-09 | 315 |
mesoderm-derived structure | 3.97e-09 | 315 |
presumptive mesoderm | 3.97e-09 | 315 |
hemopoietic organ | 3.41e-07 | 7 |
immune organ | 3.41e-07 | 7 |