FFCP PHASE2:Hg19::chr11:118966167..118966182,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3014 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4739 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3014 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4739 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P16104 | ||
|association_with_transcript=0bp_to_ENST00000530167,NM_002105,uc001pvg.2_5end | |association_with_transcript=0bp_to_ENST00000530167,NM_002105,uc001pvg.2_5end | ||
|cluster_id=chr11:118966167..118966182,- | |cluster_id=chr11:118966167..118966182,- |
Latest revision as of 02:56, 16 September 2015
Short description: | p1@H2AFX |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_H2AFX_5end |
Coexpression cluster: | C1332_lymphoma_Reticulocytes_chronic_embryonic_Renal_Hodgkin_Alveolar |
Association with transcript: | 0bp_to_ENST00000530167, NM_002105, uc001pvg.2_5end |
EntrezGene: | H2AFX |
HGNC: | 4739 |
UniProt: | P16104 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@H2AFX |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 1.08e-16 | 253 |
embryonic cell | 8.66e-11 | 250 |
migratory neural crest cell | 9.80e-08 | 41 |
epithelial cell of nephron | 3.92e-07 | 15 |
neurectodermal cell | 4.57e-07 | 59 |
kidney cell | 6.26e-07 | 17 |
kidney epithelial cell | 6.26e-07 | 17 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 3.92e-07 | 15 |
renal tubule | 3.92e-07 | 15 |
nephron tubule | 3.92e-07 | 15 |
nephron | 3.92e-07 | 15 |
uriniferous tubule | 3.92e-07 | 15 |
nephrogenic mesenchyme | 3.92e-07 | 15 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
---|---|---|
cancer | 2.51e-31 | 235 |
disease of cellular proliferation | 6.76e-30 | 239 |
hematologic cancer | 3.07e-19 | 51 |
immune system cancer | 3.07e-19 | 51 |
organ system cancer | 6.74e-18 | 137 |
leukemia | 1.00e-14 | 39 |
cell type cancer | 4.22e-14 | 143 |
carcinoma | 3.95e-11 | 106 |
myeloid leukemia | 1.64e-10 | 31 |
Showing 1 to 9 of 9 entries