FFCP PHASE1:Hg19::chr16:29674323..29674335,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6693 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11249 | |||
|TSSclassifier=strong | |||
|UniProt=P16150,A8K9B1 | |||
|association_with_transcript=23bp_to_ENST00000395389,NM_001030288,uc002dtm.2_5end | |||
|cluster_id=chr16:29674323..29674335,+ | |||
|coexpression_cluster_id=C3554 | |||
|description=CAGE_peak_8_at_SPN_5end | |||
|id=chr16:29674323..29674335,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.76e-47!172;CL:0000566!5.76e-47!172;CL:0000988!3.21e-43!182;CL:0002032!1.58e-41!165;CL:0000837!1.58e-41!165;CL:0000763!7.27e-26!112;CL:0000049!7.27e-26!112;CL:0000738!2.42e-22!140;CL:0002031!3.35e-18!124;CL:0002087!3.43e-18!119;CL:0000838!2.16e-14!52;CL:0000542!5.41e-14!53;CL:0000051!5.41e-14!53;CL:0000134!5.67e-12!358;CL:0002320!2.22e-11!365;CL:0000084!6.41e-10!25;CL:0000827!6.41e-10!25;CL:0000219!8.09e-10!390;CL:0000840!1.57e-08!5;CL:0001029!1.57e-08!5;CL:0000625!5.88e-08!11;CL:0000034!6.22e-08!444;CL:0000623!1.84e-07!3;CL:0000825!1.84e-07!3;CL:0000791!4.21e-07!18;CL:0000789!4.21e-07!18;CL:0002420!4.21e-07!18;CL:0002419!4.21e-07!18;CL:0000790!4.21e-07!18;CL:0000048!6.29e-07!430;CL:0000767!9.70e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.34e-14;3!CL:0000840;9.42e-12;5!CL:0000625;1.14e-09;11!CL:0000990;7.31e-08;8!CL:0000763;5.25e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.01e-33,168;CL:0000988,1.34e-31,177;CL:0002032,1.50e-29,161;CL:0000837,1.50e-29,161;CL:0000763,1.83e-25,108;CL:0000049,1.83e-25,108;CL:0000623,1.40e-14,3;CL:0000825,1.40e-14,3;CL:0000840,1.19e-11,5;CL:0001029,1.19e-11,5;CL:0000134,1.20e-11,354;CL:0002320,2.94e-11,361;CL:0000738,3.54e-10,136;CL:0000219,6.90e-10,386;CL:0000625,1.97e-09,11;CL:0000034,3.74e-09,441;CL:0000048,3.27e-08,427;CL:0000723,5.56e-08,433;CL:0000990,8.49e-08,8;CL:0002031,1.49e-07,120;CL:0002087,6.19e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000049;7.45e-08;108 | |||
|ontology_enrichment_disease=DOID:1240!1.71e-39!39;DOID:8692!5.83e-39!31;DOID:2531!6.82e-37!51;DOID:0060083!6.82e-37!51;DOID:0050686!9.65e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.18e-51;31!DOID:1240;1.43e-36;39!DOID:2531;6.56e-25;51!DOID:0060083;6.56e-25;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.77e-53,31;DOID:1240,7.36e-46,39;DOID:2531,2.48e-37,51;DOID:0060083,2.48e-37,51;DOID:0050686,1.65e-10,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.96e-12!102;UBERON:0003061!7.96e-12!102;UBERON:0002384!1.20e-11!375;UBERON:0002193!9.79e-11!112;UBERON:0000178!3.57e-07!15;UBERON:0000179!3.57e-07!15;UBERON:0000463!3.57e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.98e-11,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.410502947249729,0.0787107813136792,1.18009283054671,1.91914699048606,0.464448369948228,0,0,0,0,0.284338464974843,2.05520307534393,0,0.601633342410425,0.434021741431704,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0,1.05353633910031,0.393419540227666,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0,0,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0.451725357233318,1.02389288923535,3.74792179657038,0.236777252044017,0,1.20964045934839,1.06976078313403,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,1.29818957461873,1.0447784237956,1.19662164466979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17002132569619,0.445893486866185,0,0,0,0,0,0,2.95597942737566,0.616339038092582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13764596424047,1.94064817373566,3.46526197955321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0.411362273086194,1.29694662238543,0,0,0,0,0,0,0.865615277858669,0.355709216742071,1.27541018183058,1.59663497146253,2.2980644415884,0.635020748171649,0.324621940274555,1.40398589056729,5.934101654863,1.41011906195721,0,1.01575066680962,8.51116798049608,4.84319297258514,0.425846237690326,3.43505344755765,2.45792611446766,1.78940886313933,2.66958626739054,1.17232857241224,2.50565556505718,1.23087398947712,1.6227340708559,7.32758329595204,2.81974010175699,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.246169610922139,0,0,0,2.04628948090749,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53505230696119,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572682980829578,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4747128070665,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0.113312091520126,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999936979274649,5.2278947550129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0.499705779624645,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p8@SPN | |||
}} |
Latest revision as of 02:58, 16 September 2015
Short description: | p8@SPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SPN_5end |
Coexpression cluster: | C3554_acute_myelodysplastic_Natural_chronic_Basophils_CD8_CD133 |
Association with transcript: | 23bp_to_ENST00000395389, NM_001030288, uc002dtm.2_5end |
EntrezGene: | SPN |
HGNC: | 11249 |
UniProt: | P16150A8K9B1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.01e-33 | 168 |
hematopoietic cell | 1.34e-31 | 177 |
hematopoietic oligopotent progenitor cell | 1.50e-29 | 161 |
hematopoietic multipotent progenitor cell | 1.50e-29 | 161 |
myeloid cell | 1.83e-25 | 108 |
common myeloid progenitor | 1.83e-25 | 108 |
natural killer cell | 1.40e-14 | 3 |
pro-NK cell | 1.40e-14 | 3 |
immature conventional dendritic cell | 1.19e-11 | 5 |
common dendritic progenitor | 1.19e-11 | 5 |
mesenchymal cell | 1.20e-11 | 354 |
connective tissue cell | 2.94e-11 | 361 |
leukocyte | 3.54e-10 | 136 |
motile cell | 6.90e-10 | 386 |
CD8-positive, alpha-beta T cell | 1.97e-09 | 11 |
stem cell | 3.74e-09 | 441 |
multi fate stem cell | 3.27e-08 | 427 |
somatic stem cell | 5.56e-08 | 433 |
conventional dendritic cell | 8.49e-08 | 8 |
hematopoietic lineage restricted progenitor cell | 1.49e-07 | 120 |
nongranular leukocyte | 6.19e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.98e-11 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.77e-53 | 31 |
leukemia | 7.36e-46 | 39 |
hematologic cancer | 2.48e-37 | 51 |
immune system cancer | 2.48e-37 | 51 |
organ system cancer | 1.65e-10 | 137 |