FFCP PHASE1:Hg19::chr11:118972524..118972571,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1798 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2995 | |||
|TSSclassifier=strong | |||
|UniProt=F8WE55 | |||
|association_with_transcript=0bp_to_ENST00000414373,ENST00000445653,ENST00000460183,ENST00000472016_5end | |||
|cluster_id=chr11:118972524..118972571,- | |||
|description=CAGE_peak_1_at_DPAGT1_5end | |||
|id=chr11:118972524..118972571,- | |||
|ontology_enrichment_celltype=CL:0000548!6.12e-25!679;CL:0000004!6.12e-25!679;CL:0000255!6.12e-25!679;CL:0000012!2.75e-24!682;CL:0000066!1.57e-22!254;CL:0000220!5.35e-18!246;CL:0002321!7.77e-18!248;CL:0000144!2.71e-14!625;CL:0000003!1.28e-13!722;CL:0002371!1.87e-13!591;CL:0000063!8.25e-12!578;CL:0000055!2.63e-10!180;CL:0000222!6.36e-09!119;CL:1000497!4.41e-07!18;CL:0002518!4.41e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000497;9.12e-08;17!CL:0002518;9.12e-08;17!CL:1000449;4.89e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.70e-23,253;CL:0002321,7.22e-18,250;CL:0000222,6.43e-09,121;CL:1000497,9.17e-08,17;CL:0002518,9.17e-08,17;CL:1000449,4.92e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!5.81e-10!239;DOID:162!8.77e-10!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,5.81e-10,239;DOID:162,8.77e-10,235 | |||
|ontology_enrichment_uberon=UBERON:0003104!2.91e-13!238;UBERON:0009142!2.91e-13!238;UBERON:0009569!4.46e-13!113;UBERON:0002100!1.13e-12!216;UBERON:0003914!1.59e-10!118;UBERON:0000466!3.42e-10!126;UBERON:0000490!5.03e-10!138;UBERON:0004119!7.89e-10!169;UBERON:0000925!7.89e-10!169;UBERON:0006595!7.89e-10!169;UBERON:0005256!2.91e-09!143;UBERON:0002417!1.16e-08!61;UBERON:0000916!1.16e-08!61;UBERON:0000077!2.51e-08!130;UBERON:0005911!5.03e-08!82;UBERON:0001007!1.32e-07!155;UBERON:0001555!1.32e-07!155;UBERON:0007026!1.32e-07!155;UBERON:0005177!1.60e-07!107;UBERON:0005172!1.60e-07!55;UBERON:0005173!1.60e-07!55;UBERON:0001041!4.30e-07!98;UBERON:0004921!4.45e-07!129;UBERON:0004185!4.45e-07!129;UBERON:0006554!4.65e-07!44;UBERON:0000464!6.08e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.63e-07;30!UBERON:0001008;2.63e-07;30!UBERON:0006555;4.89e-07;15!UBERON:0004819;4.89e-07;15!UBERON:0001285;4.89e-07;15!UBERON:0007684;4.89e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,6.68e-15,199;UBERON:0009569,3.11e-13,112;UBERON:0003914,9.00e-11,117;UBERON:0000490,7.75e-10,148;UBERON:0004119,1.90e-09,160;UBERON:0000925,1.90e-09,160;UBERON:0006595,1.90e-09,160;UBERON:0003104,2.45e-09,160;UBERON:0009142,2.45e-09,160;UBERON:0005177,3.39e-09,101;UBERON:0002417,5.44e-09,60;UBERON:0000916,5.44e-09,60;UBERON:0005256,2.57e-08,122;UBERON:0005911,5.03e-08,82;UBERON:0006554,5.15e-08,47;UBERON:0005172,7.77e-08,54;UBERON:0005173,7.77e-08,54;UBERON:0001008,1.83e-07,48;UBERON:0001007,2.08e-07,145;UBERON:0001555,2.08e-07,145;UBERON:0007026,2.08e-07,145;UBERON:0001041,2.95e-07,87;UBERON:0004921,4.08e-07,118;UBERON:0004211,4.92e-07,15;UBERON:0009773,4.92e-07,15;UBERON:0001231,4.92e-07,15;UBERON:0001285,4.92e-07,15;UBERON:0007684,4.92e-07,15;UBERON:0004208,4.92e-07,15 | |||
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| |||
|short_description=p1@DPAGT1 | |||
}} |
Latest revision as of 02:59, 16 September 2015
Short description: | p1@DPAGT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DPAGT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000414373, ENST00000445653, ENST00000460183, ENST00000472016_5end |
EntrezGene: | DPAGT1 |
HGNC: | 2995 |
UniProt: | F8WE55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.70e-23 | 253 |
embryonic cell | 7.22e-18 | 250 |
mesodermal cell | 6.43e-09 | 121 |
kidney cell | 9.17e-08 | 17 |
kidney epithelial cell | 9.17e-08 | 17 |
epithelial cell of nephron | 4.92e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
trunk | 6.68e-15 | 199 |
subdivision of trunk | 3.11e-13 | 112 |
epithelial tube | 9.00e-11 | 117 |
unilaminar epithelium | 7.75e-10 | 148 |
endoderm-derived structure | 1.90e-09 | 160 |
endoderm | 1.90e-09 | 160 |
presumptive endoderm | 1.90e-09 | 160 |
mesenchyme | 2.45e-09 | 160 |
entire embryonic mesenchyme | 2.45e-09 | 160 |
trunk region element | 3.39e-09 | 101 |
abdominal segment of trunk | 5.44e-09 | 60 |
abdomen | 5.44e-09 | 60 |
trunk mesenchyme | 2.57e-08 | 122 |
endo-epithelium | 5.03e-08 | 82 |
urinary system structure | 5.15e-08 | 47 |
abdomen element | 7.77e-08 | 54 |
abdominal segment element | 7.77e-08 | 54 |
renal system | 1.83e-07 | 48 |
digestive system | 2.08e-07 | 145 |
digestive tract | 2.08e-07 | 145 |
primitive gut | 2.08e-07 | 145 |
foregut | 2.95e-07 | 87 |
subdivision of digestive tract | 4.08e-07 | 118 |
nephron epithelium | 4.92e-07 | 15 |
renal tubule | 4.92e-07 | 15 |
nephron tubule | 4.92e-07 | 15 |
nephron | 4.92e-07 | 15 |
uriniferous tubule | 4.92e-07 | 15 |
nephrogenic mesenchyme | 4.92e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.81e-10 | 239 |
cancer | 8.77e-10 | 235 |