FFCP PHASE1:Hg19::chr16:29674970..29675007,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:29674970..29675007,+
|short_description=p4@SPN
|description=CAGE_peak_4_at_SPN_5end
|association_with_transcript=-42bp_to_AB464706,DQ892262,DQ895464_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6693 | |EntrezGene=6693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11249 | |HGNC=11249 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_AB464706,DQ892262,DQ895464_5end | |||
|cluster_id=chr16:29674970..29675007,+ | |||
|description=CAGE_peak_4_at_SPN_5end | |||
|id=chr16:29674970..29675007,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.26e-54!172;CL:0000566!1.26e-54!172;CL:0000988!2.17e-50!182;CL:0002032!4.39e-49!165;CL:0000837!4.39e-49!165;CL:0000763!6.94e-40!112;CL:0000049!6.94e-40!112;CL:0000738!9.07e-18!140;CL:0000134!3.35e-16!358;CL:0002320!1.77e-15!365;CL:0002031!2.06e-14!124;CL:0000219!5.98e-13!390;CL:0000034!7.67e-11!444;CL:0002274!3.22e-10!5;CL:0000457!3.22e-10!5;CL:0002191!3.22e-10!5;CL:0000097!3.22e-10!5;CL:0000831!3.22e-10!5;CL:0002028!3.22e-10!5;CL:0000048!5.59e-10!430;CL:0002087!1.09e-09!119;CL:0000723!1.45e-09!436;CL:0000838!4.66e-09!52;CL:0000542!8.61e-09!53;CL:0000051!8.61e-09!53;CL:0000840!2.82e-07!5;CL:0001029!2.82e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.70e-18;5!CL:0000763;4.72e-18;100!CL:0000163;3.63e-10;9!CL:0000764;1.30e-08;2!CL:0000558;1.30e-08;2!CL:0000988;6.51e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.84e-50,108;CL:0000049,1.84e-50,108;CL:0000037,1.46e-36,168;CL:0002032,1.77e-34,161;CL:0000837,1.77e-34,161;CL:0000988,3.24e-34,177;CL:0000097,1.46e-18,5;CL:0002028,1.46e-18,5;CL:0000134,3.19e-12,354;CL:0002320,8.54e-12,361;CL:0000219,2.73e-10,386;CL:0000163,3.35e-10,9;CL:0000034,3.86e-10,441;CL:0000764,1.41e-08,2;CL:0000765,1.41e-08,2;CL:0000050,1.41e-08,2;CL:0000038,1.41e-08,2;CL:0000558,1.41e-08,2;CL:0000547,1.41e-08,2;CL:0000549,1.41e-08,2;CL:0000550,1.41e-08,2;CL:0000552,1.41e-08,2;CL:0000048,1.87e-08,427;CL:0000723,3.35e-08,433 | |||
|ontology_enrichment_development_v019=CL:0000049;2.49e-13;108 | |||
|ontology_enrichment_disease=DOID:1240!9.28e-64!39;DOID:2531!3.37e-59!51;DOID:0060083!3.37e-59!51;DOID:8692!2.36e-58!31;DOID:1036!1.02e-15!8;DOID:0050686!1.17e-13!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.98e-103;31!DOID:1240;4.21e-74;39!DOID:2531;1.07e-47;51!DOID:0060083;1.07e-47;51!DOID:1036;2.56e-29;8!DOID:0050686;1.97e-07;137 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.74e-107,31;DOID:1240,6.39e-95,39;DOID:2531,2.03e-75,51;DOID:0060083,2.03e-75,51;DOID:1036,2.16e-29,8;DOID:0050686,9.21e-23,137;DOID:162,4.57e-10,235;DOID:14566,1.06e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0002384!4.03e-15!375;UBERON:0002390!7.20e-11!102;UBERON:0003061!7.20e-11!102;UBERON:0002193!3.79e-09!112;UBERON:0004177!4.47e-08!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.27e-11,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.492603536699674,0.236132343941038,0.393364276848904,0,0.464448369948228,0,0,0,0,0,18.7904281174302,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,29.0776922873857,17.3757654524276,18.4368859342554,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0.383959833463255,0,0,0,0.403213486449465,0,0.434473211648397,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91195885475132,3.34584049250259,3.52457796419313,3.89123874225796,2.5248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0.862510299438069,0.256686072559497,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.640365346820666,0,0,0,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82371728621056,4.44440266742331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,1.92495971052672,0,0,0.721346064882224,1.70740424036194,0.797131363644112,9.97896857164083,3.06408592211787,2.11673582723883,2.59697552219644,19.0942081117152,11.1834992726264,8.61739426751628,12.5317238545034,0.50787533340481,15.7376313601626,8.87918711640609,3.40676990152261,4.46556948182494,7.98825987201991,9.61807263937388,5.50602167649298,5.47086667125713,10.0226222602287,13.5396138842484,7.03184764037556,35.6387005757667,46.5257116789903,0,0.146508179271894,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,1.53471711068062,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,6.27921025580099,18.4494966909174,4.96310453357798,4.50943828930801,4.86682602229944,2.46679852541441,21.6153747413315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239764200917,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.899895566206002,2.32140586367385,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,4.92555124496034,0,0,0,7.95041333473328,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,16.643909832286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02520268501629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.515663103788617,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.387533459016037,0.372448285775147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p4@SPN | |||
}} | }} |
Latest revision as of 03:00, 16 September 2015
Short description: | p4@SPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SPN_5end |
Coexpression cluster: | NA |
Association with transcript: | -42bp_to_AB464706, DQ892262, DQ895464_5end |
EntrezGene: | SPN |
HGNC: | 11249 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.84e-50 | 108 |
common myeloid progenitor | 1.84e-50 | 108 |
hematopoietic stem cell | 1.46e-36 | 168 |
hematopoietic oligopotent progenitor cell | 1.77e-34 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-34 | 161 |
hematopoietic cell | 3.24e-34 | 177 |
mast cell | 1.46e-18 | 5 |
basophil mast progenitor cell | 1.46e-18 | 5 |
mesenchymal cell | 3.19e-12 | 354 |
connective tissue cell | 8.54e-12 | 361 |
motile cell | 2.73e-10 | 386 |
endocrine cell | 3.35e-10 | 9 |
stem cell | 3.86e-10 | 441 |
erythroid lineage cell | 1.41e-08 | 2 |
erythroblast | 1.41e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 1.41e-08 | 2 |
erythroid progenitor cell | 1.41e-08 | 2 |
reticulocyte | 1.41e-08 | 2 |
proerythroblast | 1.41e-08 | 2 |
basophilic erythroblast | 1.41e-08 | 2 |
polychromatophilic erythroblast | 1.41e-08 | 2 |
orthochromatic erythroblast | 1.41e-08 | 2 |
multi fate stem cell | 1.87e-08 | 427 |
somatic stem cell | 3.35e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.27e-11 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.74e-107 | 31 |
leukemia | 6.39e-95 | 39 |
hematologic cancer | 2.03e-75 | 51 |
immune system cancer | 2.03e-75 | 51 |
chronic leukemia | 2.16e-29 | 8 |
organ system cancer | 9.21e-23 | 137 |
cancer | 4.57e-10 | 235 |
disease of cellular proliferation | 1.06e-09 | 239 |