FFCP PHASE1:Hg19::chr17:48711956..48711994,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8714 | |EntrezGene=8714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=54 | |HGNC=54 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAB7 | |UniProt=D6RAB7 | ||
|association_with_transcript=-143bp_to_ENST00000515707_5end | |association_with_transcript=-143bp_to_ENST00000515707_5end | ||
|cluster_id=chr17:48711956..48711994,+ | |||
|description=CAGE_peak_4_at_ABCC3_5end | |description=CAGE_peak_4_at_ABCC3_5end | ||
|id=chr17:48711956..48711994,+ | |id=chr17:48711956..48711994,+ | ||
|ontology_enrichment_celltype=CL:0002194!1.20e-15!63;CL:0000576!1.20e-15!63;CL:0000040!1.20e-15!63;CL:0000559!1.20e-15!63;CL:0002009!1.76e-15!65;CL:0000557!1.17e-12!71;CL:0000839!2.56e-12!70;CL:0000860!5.49e-12!45;CL:0002057!5.31e-11!42;CL:0000766!4.75e-10!76 | |ontology_enrichment_celltype=CL:0002194!1.20e-15!63;CL:0000576!1.20e-15!63;CL:0000040!1.20e-15!63;CL:0000559!1.20e-15!63;CL:0002009!1.76e-15!65;CL:0000557!1.17e-12!71;CL:0000839!2.56e-12!70;CL:0000860!5.49e-12!45;CL:0002057!5.31e-11!42;CL:0000766!4.75e-10!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.55e-33;33!CL:0002057;3.55e-33;33!CL:0000473;4.69e-33;39!CL:0000234;4.69e-33;39!CL:0000576;3.25e-15;48!CL:0000766;4.56e-10;69!CL:0000235;2.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.58e-33,48;CL:0000234,5.58e-33,48;CL:0002194,9.38e-32,59;CL:0000576,9.38e-32,59;CL:0000040,9.38e-32,59;CL:0000559,9.38e-32,59;CL:0002009,1.93e-30,61;CL:0000839,1.67e-27,66;CL:0000860,3.40e-27,42;CL:0002057,3.40e-27,42;CL:0000557,5.71e-27,67;CL:0000766,1.61e-24,72;CL:0000763,1.24e-13,108;CL:0000049,1.24e-13,108;CL:0002087,2.53e-12,115;CL:0002031,1.73e-11,120;CL:0000134,6.30e-11,354;CL:0000219,1.61e-10,386;CL:0002320,1.94e-10,361;CL:0000738,3.01e-09,136;CL:0000048,2.98e-08,427;CL:0000723,6.15e-08,433;CL:0000034,1.56e-07,441;CL:0000235,2.37e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;3.04e-20;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!4.40e-13!511;UBERON:0002405!1.27e-12!115;UBERON:0002371!4.52e-12!80;UBERON:0001474!1.42e-10!86;UBERON:0004765!4.64e-10!101;UBERON:0001434!4.64e-10!101;UBERON:0000926!7.52e-10!448;UBERON:0004120!7.52e-10!448;UBERON:0006603!7.52e-10!448;UBERON:0000468!2.29e-09!659;UBERON:0000467!7.30e-09!625;UBERON:0000480!9.69e-09!626;UBERON:0002193!2.69e-08!112;UBERON:0002390!1.74e-07!102;UBERON:0003061!1.74e-07!102 | |ontology_enrichment_uberon=UBERON:0000062!4.40e-13!511;UBERON:0002405!1.27e-12!115;UBERON:0002371!4.52e-12!80;UBERON:0001474!1.42e-10!86;UBERON:0004765!4.64e-10!101;UBERON:0001434!4.64e-10!101;UBERON:0000926!7.52e-10!448;UBERON:0004120!7.52e-10!448;UBERON:0006603!7.52e-10!448;UBERON:0000468!2.29e-09!659;UBERON:0000467!7.30e-09!625;UBERON:0000480!9.69e-09!626;UBERON:0002193!2.69e-08!112;UBERON:0002390!1.74e-07!102;UBERON:0003061!1.74e-07!102 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.95e-24,76;UBERON:0001474,5.07e-22,82;UBERON:0002405,6.14e-20,93;UBERON:0004765,2.62e-19,90;UBERON:0001434,7.12e-18,100;UBERON:0002390,4.79e-17,98;UBERON:0003061,4.79e-17,98;UBERON:0002193,5.78e-16,108;UBERON:0002204,2.16e-10,167;UBERON:0002384,2.32e-10,371;UBERON:0003081,2.81e-08,203;UBERON:0000926,4.86e-07,315;UBERON:0004120,4.86e-07,315;UBERON:0006603,4.86e-07,315 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.563817616383885,2.00146596706261,0,0,0,1.26343974685366,0.522371256399677,0,0.697801167972428,0,0,0.123766352960047,0.331397375727916,0,0,1.46062018077475,0,0.246242116153576,0.408001382488506,0.313454721478088,0.572471974262113,0.684372125364421,1.00434111675842,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0.895661896959697,0.647787332037959,0.515151135268373,2.32637182047304,2.26725566213286,1.69808842831471,5.11343881192506,6.98985409637104,4.02618282163635,1.7261543539329,0.512321413058201,0.945928919554341,5.5159308917859,5.16387746867061,5.41705946377367,6.96496656307637,10.3704337021981,7.19115150224271,3.06083892370903,4.49300637906531,1.27867425159808,0,0,0,4.64334781805734,9.07816359505824,2.4912889959823,2.26123798731069,1.0429658368404,1.73751075764093,0.605399502633369,2.57794345191295,0.949387162322653,0,0,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.361439152384566,2.50668955317945,1.30361867064741,0,1.94653948121054,0.0945348171640679,0.443458794925128,0.175669571386252,0.196468613246569,0,0,5.8418530857843,4.70150290708022,4.38761269712255,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0.264818361626438,0,0.354668382198357,0,0,0.24666754841716,1.55605517699883,0,0,0.151357427644931,0,0,0.312160076830321,0,0.448346041655403,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.619954687054593,0,0,0.910161361938026,4.31170885089743,0.168336113954066,0,0,0.438977620880838,0,0.600952235626387,0.113432183160021,0.179389635688862,0,1.69545520927649,0.300091096084402,0.515262646192195,1.54584324027377,1.30281799432113,0,0.0974370051611986,1.00973509697646,1.10459878370759,0.323292113637624,2.13005755509969,0.302256294682921,0,0,0,0.286804595389004,0,0,0,0,0,0,0,3.21620469096443,2.76269842704961,0.464367928031979,0,0.354920400119532,0.337169380156203,0.241011029883482,0.992645754591546,1.52515610864684,0.71181185733329,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.122988438543114,0.686271241194102,0,0,0.100528972411631,0.0925884451585296,0.651616610620649,0,0,0.231860809950154,0.234817388471643,0,0.925971025153221,0.380508304469197,0,0,2.46217006087397,5.38209809820247,5.20209068010549,0,0,0,0.0895585227028483,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.797814349754612,3.12022310734098,0,0,0,0.57191197463259,0.542621605391443,0.823240336780769,0.977208552881205,0,0.791951872933429,0.602878754119172,0,0.299918973546171,0,0,2.10833939483032,0,0,0,0.144781306667579,2.26023954805422,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0,0.542530047399471,0.415941723061614,0,0.315404830067869,0.937131319941706,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0.215714200818617,0,0,0,0.30239029332968,0.248107807818777,1.53461973288062,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0.355123450626254,0.246381468041427,0,0,0.241718899183244,0,0.0920809889358963,0.574072240823034,0.546273504020151,0.131124414959424,0.451199612907412,0,0.784349769176855,0,0.105551628892876,0,0,0,0,1.89662506280697,2.00675909541941,0.254876273045038,0,0.447749509444357,0,0,0,0.328014645699706,0,0.412164046590889,0,0,0,0,1.6068392984416,0.096670718292122,0.616194468458578,0.15350367472613,0,0.429680979473094,0.290033387828457,0.255679882248303,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.687743287091848,0,0.354761064070598,2.11107635297664,0.658589785919804,1.51789269506286,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0.276283915531148,0,3.27259784006895,0,0,0.0898683511473268,5.72867758961949,0,0,0,1.11136990144637,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0.230850775511391,0.569710279235006,0,0,0,0.31900115973192,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,3.32326936353593,1.323967823502,0.941798755221676,1.19472429772959,2.56148591426813,0,0,0,0,0,0,0.290268993867255,0.584714536689484,0.410577285266046,0.0969890164884194,0,0,0.137041924646751,0.19871461170299,0.0633107959558787,0,0.400794101257669,0.426905989478705,0.19980960958213,0,0,0,0.576219191952599,0.869767748958028,1.41416420770077,0.407712618220842,0.941425616810999,1.52997326454483,0.866851769704557,0,0,0,6.44648162129936,0,0,0,0,0,0,0,0,1.08089965062721,0,0.0787831823072236,0,0.0674035438541849,1.08270229666224,0,0,0,0,0,0,0.44994778310300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| ||
|short_description=p4@ABCC3 | |short_description=p4@ABCC3 | ||
}} | }} |
Latest revision as of 03:21, 16 September 2015
Short description: | p4@ABCC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ABCC3_5end |
Coexpression cluster: | NA |
Association with transcript: | -143bp_to_ENST00000515707_5end |
EntrezGene: | ABCC3 |
HGNC: | 54 |
UniProt: | D6RAB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.58e-33 | 48 |
phagocyte | 5.58e-33 | 48 |
monopoietic cell | 9.38e-32 | 59 |
monocyte | 9.38e-32 | 59 |
monoblast | 9.38e-32 | 59 |
promonocyte | 9.38e-32 | 59 |
macrophage dendritic cell progenitor | 1.93e-30 | 61 |
myeloid lineage restricted progenitor cell | 1.67e-27 | 66 |
classical monocyte | 3.40e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.40e-27 | 42 |
granulocyte monocyte progenitor cell | 5.71e-27 | 67 |
myeloid leukocyte | 1.61e-24 | 72 |
myeloid cell | 1.24e-13 | 108 |
common myeloid progenitor | 1.24e-13 | 108 |
nongranular leukocyte | 2.53e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.73e-11 | 120 |
mesenchymal cell | 6.30e-11 | 354 |
motile cell | 1.61e-10 | 386 |
connective tissue cell | 1.94e-10 | 361 |
leukocyte | 3.01e-09 | 136 |
multi fate stem cell | 2.98e-08 | 427 |
somatic stem cell | 6.15e-08 | 433 |
stem cell | 1.56e-07 | 441 |
macrophage | 2.37e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.95e-24 | 76 |
bone element | 5.07e-22 | 82 |
immune system | 6.14e-20 | 93 |
skeletal element | 2.62e-19 | 90 |
skeletal system | 7.12e-18 | 100 |
hematopoietic system | 4.79e-17 | 98 |
blood island | 4.79e-17 | 98 |
hemolymphoid system | 5.78e-16 | 108 |
musculoskeletal system | 2.16e-10 | 167 |
connective tissue | 2.32e-10 | 371 |
lateral plate mesoderm | 2.81e-08 | 203 |
mesoderm | 4.86e-07 | 315 |
mesoderm-derived structure | 4.86e-07 | 315 |
presumptive mesoderm | 4.86e-07 | 315 |