FFCP PHASE1:Hg19::chr11:119246963..119246974,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:119246963..119246974,- to FFCP PHASE1:Hg19::chr11:119246963..119246974,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9099 | |EntrezGene=9099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12618 | |HGNC=12618 | ||
|TSSclassifier=strong | |||
|UniProt=E9PSH6 | |UniProt=E9PSH6 | ||
|association_with_transcript=91bp_to_ENST00000531070_5end | |||
|cluster_id=chr11:119246963..119246974,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_13_at_USP2_5end | |||
|id=chr11:119246963..119246974,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.49e-25;3!UBERON:0003057;5.49e-25;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.47e-64!57;UBERON:0005068!1.47e-64!57;UBERON:0006241!1.47e-64!57;UBERON:0007135!1.47e-64!57;UBERON:0007023!1.57e-58!115;UBERON:0005743!1.70e-55!86;UBERON:0002616!6.17e-52!59;UBERON:0003075!4.77e-51!86;UBERON:0007284!4.77e-51!86;UBERON:0001017!1.10e-50!82;UBERON:0002780!1.60e-49!41;UBERON:0001890!1.60e-49!41;UBERON:0006240!1.60e-49!41;UBERON:0000073!3.99e-49!94;UBERON:0001016!3.99e-49!94;UBERON:0002346!3.03e-48!90;UBERON:0003080!3.68e-48!42;UBERON:0000955!8.19e-45!69;UBERON:0006238!8.19e-45!69;UBERON:0001893!8.50e-45!34;UBERON:0002020!1.03e-44!34;UBERON:0003528!1.03e-44!34;UBERON:0002791!1.46e-42!33;UBERON:0003056!2.12e-40!61;UBERON:0001869!7.43e-40!32;UBERON:0000033!1.02e-34!123;UBERON:0000153!1.54e-32!129;UBERON:0007811!1.54e-32!129;UBERON:0004121!1.87e-28!169;UBERON:0000924!1.70e-27!173;UBERON:0006601!1.70e-27!173;UBERON:0002619!1.70e-25!22;UBERON:0000956!5.47e-25!25;UBERON:0000203!5.47e-25!25;UBERON:0002308!2.24e-23!9;UBERON:0000125!2.24e-23!9;UBERON:0000025!1.14e-22!194;UBERON:0004111!1.86e-21!241;UBERON:0001950!4.24e-21!20;UBERON:0000477!1.46e-18!286;UBERON:0009663!1.93e-18!7;UBERON:0002420!2.91e-18!9;UBERON:0007245!2.91e-18!9;UBERON:0010009!2.91e-18!9;UBERON:0010011!2.91e-18!9;UBERON:0000454!2.91e-18!9;UBERON:0002298!3.68e-17!8;UBERON:0003076!8.57e-17!15;UBERON:0003057!8.57e-17!15;UBERON:0000483!4.41e-16!309;UBERON:0000119!8.72e-16!312;UBERON:0000475!3.28e-14!365;UBERON:0000481!9.79e-11!347;UBERON:0000200!1.20e-10!6;UBERON:0000369!1.45e-10!4;UBERON:0002435!1.45e-10!4;UBERON:0000204!1.45e-10!4;UBERON:0010082!1.45e-10!4;UBERON:0004733!1.50e-10!12;UBERON:0002028!1.50e-10!12;UBERON:0007277!1.50e-10!12;UBERON:0004732!1.20e-09!13;UBERON:0000062!1.25e-09!511;UBERON:0001896!1.41e-09!3;UBERON:0005290!1.41e-09!3;UBERON:0010096!1.41e-09!3;UBERON:0006331!2.45e-09!3;UBERON:0000064!2.76e-09!219;UBERON:0000988!3.12e-09!3;UBERON:0002240!4.09e-09!3;UBERON:0000349!4.17e-09!5;UBERON:0002021!5.93e-09!5;UBERON:0002771!2.84e-08!3;UBERON:0005383!3.14e-08!3;UBERON:0005382!3.14e-08!3;UBERON:0001871!7.92e-08!7;UBERON:0000467!2.50e-07!625;UBERON:0000480!2.74e-07!626;UBERON:0000922!2.89e-07!612;UBERON:0002050!5.27e-07!605;UBERON:0005423!5.27e-07!605;UBERON:0001875!6.86e-07!2;UBERON:0006514!6.86e-07!2;UBERON:0001897!7.88e-07!2;UBERON:0001954!9.56e-07!2;UBERON:0003022!9.56e-07!2;UBERON:0002421!9.56e-07!2;UBERON:0002600!9.56e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.22e-27;6!UBERON:0001896;5.49e-25;3!UBERON:0002240;5.49e-25;3!UBERON:0005174;5.49e-25;3!UBERON:0005290;5.49e-25;3!UBERON:0001137;5.49e-25;3!UBERON:0002336;2.25e-19;1!UBERON:0002038;2.25e-19;1!UBERON:0011215;2.25e-19;1!UBERON:0001018;2.25e-19;1!UBERON:0009661;2.25e-19;1!UBERON:0002950;2.25e-19;1!UBERON:0002473;2.25e-19;1!UBERON:0005340;2.25e-19;1!UBERON:0003544;2.25e-19;1!UBERON:0005970;2.25e-19;1!UBERON:0002316;2.25e-19;1!UBERON:0001020;2.25e-19;1!UBERON:0001891;2.25e-19;1!UBERON:0002437;2.25e-19;1!UBERON:0000073;6.89e-19;53!UBERON:0002616;6.89e-19;53!UBERON:0004733;3.44e-14;12!UBERON:0002028;3.44e-14;12!UBERON:0002780;2.58e-13;41!UBERON:0001890;2.58e-13;41!UBERON:0004732;3.78e-13;13!UBERON:0001017;4.02e-12;75!UBERON:0009663;2.68e-11;7!UBERON:0001897;2.27e-10;2!UBERON:0001954;2.27e-10;2!UBERON:0001875;2.27e-10;2!UBERON:0005162;2.27e-10;2!UBERON:0000122;2.27e-10;2!UBERON:0003022;2.27e-10;2!UBERON:0002421;2.27e-10;2!UBERON:0006514;2.27e-10;2!UBERON:0010225;2.27e-10;2!UBERON:0002600;2.27e-10;2!UBERON:0001893;1.67e-09;34!UBERON:0001016;4.15e-09;83!UBERON:0002420;5.41e-09;9!UBERON:0000125;5.41e-09;9!UBERON:0007245;5.41e-09;9!UBERON:0002308;5.41e-09;9!UBERON:0010009;5.41e-09;9!UBERON:0010011;5.41e-09;9!UBERON:0000454;5.41e-09;9!UBERON:0007023;1.27e-08;114!UBERON:0002791;1.02e-07;32!UBERON:0000955;1.47e-07;68!UBERON:0000988;2.47e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.74e-37,56;UBERON:0005068,1.74e-37,56;UBERON:0006241,1.74e-37,56;UBERON:0007135,1.74e-37,56;UBERON:0003076,6.98e-30,15;UBERON:0003057,6.98e-30,15;UBERON:0002298,2.12e-27,6;UBERON:0000073,1.88e-26,53;UBERON:0002616,1.88e-26,53;UBERON:0001017,1.34e-25,81;UBERON:0003075,1.34e-25,82;UBERON:0007284,1.34e-25,82;UBERON:0001896,6.22e-25,3;UBERON:0002240,6.22e-25,3;UBERON:0005174,6.22e-25,3;UBERON:0005290,6.22e-25,3;UBERON:0001137,6.22e-25,3;UBERON:0010096,6.22e-25,3;UBERON:0002346,2.13e-24,86;UBERON:0001016,4.81e-23,89;UBERON:0000955,2.63e-20,68;UBERON:0006238,2.63e-20,68;UBERON:0010371,4.01e-20,104;UBERON:0002336,8.95e-20,1;UBERON:0011215,8.95e-20,1;UBERON:0001018,8.95e-20,1;UBERON:0002473,8.95e-20,1;UBERON:0005340,8.95e-20,1;UBERON:0003544,8.95e-20,1;UBERON:0005970,8.95e-20,1;UBERON:0002316,8.95e-20,1;UBERON:0001020,8.95e-20,1;UBERON:0002437,8.95e-20,1;UBERON:0002038,1.08e-19,1;UBERON:0009661,1.08e-19,1;UBERON:0002950,1.08e-19,1;UBERON:0001891,1.08e-19,1;UBERON:0009616,1.08e-19,1;UBERON:0010286,1.08e-19,1;UBERON:0010314,9.24e-16,132;UBERON:0002780,2.03e-15,41;UBERON:0001890,2.03e-15,41;UBERON:0003080,2.03e-15,41;UBERON:0006240,2.03e-15,41;UBERON:0007023,3.44e-15,114;UBERON:0004733,4.52e-14,12;UBERON:0002028,4.52e-14,12;UBERON:0007277,4.52e-14,12;UBERON:0004732,4.85e-13,13;UBERON:0001893,4.92e-13,34;UBERON:0004121,6.88e-12,171;UBERON:0000924,6.88e-12,171;UBERON:0006601,6.88e-12,171;UBERON:0009663,2.30e-11,7;UBERON:0000025,1.20e-10,192;UBERON:0005162,1.43e-10,2;UBERON:0000122,1.43e-10,2;UBERON:0001897,1.72e-10,2;UBERON:0010225,1.72e-10,2;UBERON:0003056,2.10e-10,61;UBERON:0001954,2.27e-10,2;UBERON:0003022,2.27e-10,2;UBERON:0002421,2.27e-10,2;UBERON:0002600,2.27e-10,2;UBERON:0001875,2.49e-10,2;UBERON:0006514,2.49e-10,2;UBERON:0002791,4.33e-09,32;UBERON:0002420,4.80e-09,9;UBERON:0000125,4.80e-09,9;UBERON:0007245,4.80e-09,9;UBERON:0002308,4.80e-09,9;UBERON:0010009,4.80e-09,9;UBERON:0010011,4.80e-09,9;UBERON:0000454,4.80e-09,9;UBERON:0011216,6.17e-09,223;UBERON:0003528,1.38e-08,34;UBERON:0002020,1.38e-08,34;UBERON:0004111,2.27e-08,240;UBERON:0000988,3.35e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88723172345896,0,0.702793337176017,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0.225980740780532,0,0,0.443175571691151,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.958337652243951,0,0,0,0,0,0,0.199679000498991,0.858452096273142,0,0,0,0,0.472699093843342,0.576911008668165,0.943649613958588,0.295282444544246,0,0.795229689809303,1.22583065500418,0,0,0,0,0,0.364497339948148,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.79339561045614,0,0,0.106787412567695,0.943225830597996,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,1.14681839138014,0.998361463831671,1.36612086471044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,1.11743701340006,0.82046545696302,0.252071696221718,0.691572524642179,0.807378228159255,0,0.196295437002051,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.607838261565552,0,0.826747186004736,0.253663240775627,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0,1.08751572762931,0.394636641377094,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.428859265059938,0,0,0,0,0.207216164163037,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,1.17785080268967,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0,1.86341458096887,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,1.44806194206653,0,0,0,0,0,0.0636471582781649,0.606351566874658,0,0,0.0673520530145875,0.358611026963382,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88723172345896,0,0.702793337176017,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0.225980740780532,0,0,0.443175571691151,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.958337652243951,0,0,0,0,0,0,0.199679000498991,0.858452096273142,0,0,0,0,0.472699093843342,0.576911008668165,0.943649613958588,0.295282444544246,0,0.795229689809303,1.22583065500418,0,0,0,0,0,0.364497339948148,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.79339561045614,0,0,0.106787412567695,0.943225830597996,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,1.14681839138014,0.998361463831671,1.36612086471044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,1.11743701340006,0.82046545696302,0.252071696221718,0.691572524642179,0.807378228159255,0,0.196295437002051,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.607838261565552,0,0.826747186004736,0.253663240775627,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0,1.08751572762931,0.394636641377094,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.428859265059938,0,0,0,0,0.207216164163037,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,1.17785080268967,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0,1.86341458096887,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,1.44806194206653,0,0,0,0,0,0.0636471582781649,0.606351566874658,0,0,0.0673520530145875,0.358611026963382,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p13@USP2 | |||
}} | }} |
Latest revision as of 03:39, 16 September 2015
Short description: | p13@USP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_USP2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 91bp_to_ENST00000531070_5end |
EntrezGene: | USP2 |
HGNC: | 12618 |
UniProt: | E9PSH6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data