FFCP PHASE1:Hg19::chr19:14223852..14223882,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5566 | |EntrezGene=5566 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9380 | |HGNC=9380 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z708 | |UniProt=B7Z708 | ||
|association_with_transcript=-393bp_to_ENST00000536649,uc010xnm.1_5end | |association_with_transcript=-393bp_to_ENST00000536649,uc010xnm.1_5end | ||
|cluster_id=chr19:14223852..14223882,- | |||
|coexpression_cluster_id=C337 | |||
|description=CAGE_peak_7_at_PRKACA_5end | |description=CAGE_peak_7_at_PRKACA_5end | ||
|id=chr19:14223852..14223882,- | |id=chr19:14223852..14223882,- | ||
|ontology_enrichment_celltype=CL:0000746!5.60e-08!3;CL:0000513!5.60e-08!3 | |ontology_enrichment_celltype=CL:0000746!5.60e-08!3;CL:0000513!5.60e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000746;1.96e-14;3!CL:0000737;3.60e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.83e-14,3;CL:0000513,1.83e-14,3;CL:0000737,3.42e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.28e-23;7!CL:0000513;1.96e-14;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.09e-08!21;UBERON:0009196!1.09e-08!21;UBERON:0009117!1.09e-08!21;UBERON:0005564!1.09e-08!21;UBERON:0002106!2.01e-08!3;UBERON:0004854!2.01e-08!3;UBERON:0009034!2.01e-08!3;UBERON:0002095!2.01e-08!3;UBERON:0004782!2.01e-08!3;UBERON:0003281!2.01e-08!3;UBERON:0009664!2.01e-08!3;UBERON:0002296!2.01e-08!3;UBERON:0005602!2.01e-08!3;UBERON:0001179!2.01e-08!3;UBERON:0006293!2.01e-08!3;UBERON:0004176!2.90e-08!22;UBERON:0002323!5.26e-08!46;UBERON:0004458!2.02e-07!49;UBERON:0004177!2.17e-07!7;UBERON:0005156!4.24e-07!59;UBERON:0000990!4.24e-07!59;UBERON:0007023!5.79e-07!115;UBERON:0002079!8.21e-07!1;UBERON:0005057!9.73e-07!26;UBERON:0000992!9.88e-07!13 | |ontology_enrichment_uberon=UBERON:0000991!1.09e-08!21;UBERON:0009196!1.09e-08!21;UBERON:0009117!1.09e-08!21;UBERON:0005564!1.09e-08!21;UBERON:0002106!2.01e-08!3;UBERON:0004854!2.01e-08!3;UBERON:0009034!2.01e-08!3;UBERON:0002095!2.01e-08!3;UBERON:0004782!2.01e-08!3;UBERON:0003281!2.01e-08!3;UBERON:0009664!2.01e-08!3;UBERON:0002296!2.01e-08!3;UBERON:0005602!2.01e-08!3;UBERON:0001179!2.01e-08!3;UBERON:0006293!2.01e-08!3;UBERON:0004176!2.90e-08!22;UBERON:0002323!5.26e-08!46;UBERON:0004458!2.02e-07!49;UBERON:0004177!2.17e-07!7;UBERON:0005156!4.24e-07!59;UBERON:0000990!4.24e-07!59;UBERON:0007023!5.79e-07!115;UBERON:0002079!8.21e-07!1;UBERON:0005057!9.73e-07!26;UBERON:0000992!9.88e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.19e-53;3!UBERON:0004177;1.44e-32;5!UBERON:0005057;1.44e-32;5!UBERON:0002075;7.42e-10;18!UBERON:0004458;5.91e-08;48!UBERON:0002323;3.28e-07;45!UBERON:0000077;6.82e-07;27!UBERON:0002405;6.82e-07;27!UBERON:0002553;8.01e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.19e-53,3;UBERON:0004854,2.19e-53,3;UBERON:0009034,2.19e-53,3;UBERON:0002095,2.19e-53,3;UBERON:0004782,2.19e-53,3;UBERON:0003281,2.19e-53,3;UBERON:0009664,2.19e-53,3;UBERON:0002296,2.19e-53,3;UBERON:0005602,2.19e-53,3;UBERON:0001179,2.19e-53,3;UBERON:0006293,2.19e-53,3;UBERON:0004177,1.28e-23,7;UBERON:0005057,1.28e-23,7;UBERON:0000945,8.12e-21,8;UBERON:0010039,8.12e-21,8;UBERON:0004457,2.94e-14,12;UBERON:0000042,2.94e-14,12;UBERON:0003887,2.94e-14,12;UBERON:0002075,7.42e-10,18;UBERON:0002323,1.36e-08,46;UBERON:0004458,4.12e-08,49;UBERON:0003886,1.99e-07,54;UBERON:0005172,2.17e-07,54;UBERON:0005173,2.17e-07,54;UBERON:0005409,4.02e-07,25;UBERON:0001048,8.66e-07,160 | |||
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|short_description=p7@PRKACA | |short_description=p7@PRKACA | ||
}} | }} |
Latest revision as of 03:47, 16 September 2015
Short description: | p7@PRKACA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PRKACA_5end |
Coexpression cluster: | C337_ovary_testis_Adipocyte_mesothelioma_chorionic_placenta_spleen |
Association with transcript: | -393bp_to_ENST00000536649, uc010xnm.1_5end |
EntrezGene: | PRKACA |
HGNC: | 9380 |
UniProt: | B7Z708 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.83e-14 | 3 |
cardiac muscle myoblast | 1.83e-14 | 3 |
striated muscle cell | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.19e-53 | 3 |
gastrointestinal system mesentery | 2.19e-53 | 3 |
stomach region | 2.19e-53 | 3 |
mesentery | 2.19e-53 | 3 |
gastrointestinal system serosa | 2.19e-53 | 3 |
mesentery of stomach | 2.19e-53 | 3 |
gut mesentery | 2.19e-53 | 3 |
dorsal mesentery | 2.19e-53 | 3 |
dorsal mesogastrium | 2.19e-53 | 3 |
peritoneal cavity | 2.19e-53 | 3 |
spleen primordium | 2.19e-53 | 3 |
hemopoietic organ | 1.28e-23 | 7 |
immune organ | 1.28e-23 | 7 |
stomach | 8.12e-21 | 8 |
food storage organ | 8.12e-21 | 8 |
cavity lining | 2.94e-14 | 12 |
serous membrane | 2.94e-14 | 12 |
intraembryonic coelom | 2.94e-14 | 12 |
viscus | 7.42e-10 | 18 |
body cavity | 1.36e-08 | 46 |
body cavity or lining | 4.12e-08 | 49 |
body cavity precursor | 1.99e-07 | 54 |
abdomen element | 2.17e-07 | 54 |
abdominal segment element | 2.17e-07 | 54 |
gastrointestinal system | 4.02e-07 | 25 |
primordium | 8.66e-07 | 160 |