FFCP PHASE1:Hg19::chr17:4890695..4890773,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:4890695..4890773,-
|short_description=p2@CAMTA2
|description=CAGE_peak_2_at_CAMTA2_5end
|association_with_transcript=-30bp_to_ENST00000361571,ENST00000414...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23125 | |EntrezGene=23125 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18807 | |HGNC=18807 | ||
|TSSclassifier=strong | |||
|UniProt=E7EWU5,O94983 | |UniProt=E7EWU5,O94983 | ||
|association_with_transcript=-30bp_to_ENST00000361571,ENST00000414043,NM_001171167,NM_001171168,uc002gag.1,uc010cku.1_5end | |||
|cluster_id=chr17:4890695..4890773,- | |||
|description=CAGE_peak_2_at_CAMTA2_5end | |||
|id=chr17:4890695..4890773,- | |||
|ontology_enrichment_celltype=CL:0000115!9.18e-11!35;CL:0002139!4.83e-10!24;CL:0002078!5.60e-10!44;CL:0000066!3.01e-09!254;CL:0000071!7.78e-08!18;CL:0002546!7.78e-08!18;CL:0002321!5.62e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.10e-10;24!CL:0000115;8.14e-09;36!CL:0000071;6.21e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.66e-11,36;CL:0002139,3.89e-10,24;CL:0002078,5.03e-10,45;CL:0000066,3.04e-09,253;CL:0000071,6.63e-08,18;CL:0002546,6.63e-08,18;CL:0002321,3.41e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;6.21e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!3.35e-08!107;UBERON:0001986!7.78e-08!18;UBERON:0004638!7.78e-08!18;UBERON:0004852!7.78e-08!18;UBERON:0000483!2.28e-07!309;UBERON:0000119!5.30e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.21e-08;18!UBERON:0001986;6.21e-08;18!UBERON:0004852;6.21e-08;18!UBERON:0002113;7.80e-07;24!UBERON:0011143;7.80e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.39e-08,101;UBERON:0004638,6.63e-08,18;UBERON:0001986,6.63e-08,18;UBERON:0004852,6.63e-08,18 | |||
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| ||
|short_description=p2@CAMTA2 | |||
}} | }} |
Latest revision as of 04:18, 16 September 2015
Short description: | p2@CAMTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CAMTA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000361571, ENST00000414043, NM_001171167, NM_001171168, uc002gag.1, uc010cku.1_5end |
EntrezGene: | CAMTA2 |
HGNC: | 18807 |
UniProt: | E7EWU5O94983 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.66e-11 | 36 |
endothelial cell of vascular tree | 3.89e-10 | 24 |
meso-epithelial cell | 5.03e-10 | 45 |
epithelial cell | 3.04e-09 | 253 |
blood vessel endothelial cell | 6.63e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.63e-08 | 18 |
embryonic cell | 3.41e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.39e-08 | 101 |
blood vessel endothelium | 6.63e-08 | 18 |
endothelium | 6.63e-08 | 18 |
cardiovascular system endothelium | 6.63e-08 | 18 |