FFCP PHASE1:Hg19::chr12:10865908..10865915,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8531 | |EntrezGene=8531 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2428 | |HGNC=2428 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_BC150580_5end | |association_with_transcript=18bp_to_BC150580_5end | ||
|cluster_id=chr12:10865908..10865915,- | |||
|description=CAGE_peak_37_at_CSDA_5end | |description=CAGE_peak_37_at_CSDA_5end | ||
|id=chr12:10865908..10865915,- | |id=chr12:10865908..10865915,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002188;6.55e-08;5!CL:0002138;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,7.01e-08,5;CL:0005020,9.49e-07,6;CL:0002138,9.49e-07,6;CL:0005022,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0010226;5.05e-34;1!CL:0005022;8.48e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.06e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!3.06e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002084;5.05e-34;1!UBERON:0001389;5.05e-34;1!UBERON:0000026;5.05e-34;1!UBERON:0008784;5.05e-34;1!UBERON:0006058;5.05e-34;1!UBERON:0003663;5.05e-34;1!UBERON:0004256;5.05e-34;1!UBERON:0002082;5.05e-34;1!UBERON:0004708;5.05e-34;1!UBERON:0002101;5.05e-34;1!UBERON:0004709;5.05e-34;1!UBERON:0002529;5.05e-34;1!UBERON:0010538;5.05e-34;1!UBERON:0003661;5.05e-34;1!UBERON:0010890;5.05e-34;1!UBERON:0002471;5.05e-34;1!UBERON:0001383;5.05e-34;1!UBERON:0010758;5.05e-34;1!UBERON:0010707;5.05e-34;1!UBERON:0000978;5.05e-34;1!UBERON:0002103;5.05e-34;1!UBERON:0001665;5.05e-34;1!UBERON:0003823;5.05e-34;1!UBERON:0000154;5.05e-34;1!UBERON:0010709;5.05e-34;1!UBERON:0005090;9.07e-18;2!UBERON:0001630;9.07e-18;2!UBERON:0004151;2.59e-12;3!UBERON:0001134;2.66e-09;16!UBERON:0002036;2.66e-09;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,2.58e-34,1;UBERON:0001389,2.58e-34,1;UBERON:0000026,2.58e-34,1;UBERON:0008784,2.58e-34,1;UBERON:0006058,2.58e-34,1;UBERON:0003663,2.58e-34,1;UBERON:0004256,2.58e-34,1;UBERON:0004708,2.58e-34,1;UBERON:0002101,2.58e-34,1;UBERON:0004709,2.58e-34,1;UBERON:0002529,2.58e-34,1;UBERON:0010538,2.58e-34,1;UBERON:0003661,2.58e-34,1;UBERON:0010890,2.58e-34,1;UBERON:0002471,2.58e-34,1;UBERON:0001383,2.58e-34,1;UBERON:0004357,2.58e-34,1;UBERON:0004347,2.58e-34,1;UBERON:0005420,2.58e-34,1;UBERON:0005732,2.58e-34,1;UBERON:0010758,2.58e-34,1;UBERON:0010707,2.58e-34,1;UBERON:0000978,2.58e-34,1;UBERON:0002103,2.58e-34,1;UBERON:0001665,2.58e-34,1;UBERON:0003823,2.58e-34,1;UBERON:0000154,2.58e-34,1;UBERON:0010709,2.58e-34,1;UBERON:0005733,2.58e-34,1;UBERON:0005730,2.58e-34,1;UBERON:0002084,5.05e-34,1;UBERON:0002082,5.05e-34,1;UBERON:0010226,5.05e-34,1;UBERON:0005090,6.48e-18,2;UBERON:0001630,6.48e-18,2;UBERON:0004151,2.59e-12,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47296445977717,0,0,1.35426486594342,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0,1.06729878806013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0.482022059766964,0,0,0.474541238222193,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0.542530047399471,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0.164230914106418,0.290967049465258,0.0882561266915003,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0.669514372325618,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.104909176269996,0,0.35857467866569,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0.116241425368125,0.347716544605159,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,1.94228651156368,2.46390736454993,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,0.5290268405154,0.371995018166751,0,0,0,0.109265571963696,0.253397002022874,0,0,0,0,0.151557396436479,0.535928260312357,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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| ||
|short_description=p37@CSDA | |short_description=p37@CSDA | ||
}} | }} |
Latest revision as of 04:20, 16 September 2015
Short description: | p37@CSDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_37_at_CSDA_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_BC150580_5end |
EntrezGene: | CSDA |
HGNC: | 2428 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 7.01e-08 | 5 |
lymphangioblast | 9.49e-07 | 6 |
endothelial cell of lymphatic vessel | 9.49e-07 | 6 |
vascular lymphangioblast | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 2.58e-34 | 1 |
soleus muscle | 2.58e-34 | 1 |
appendage | 2.58e-34 | 1 |
lower limb segment | 2.58e-34 | 1 |
multi-limb segment region | 2.58e-34 | 1 |
hindlimb muscle | 2.58e-34 | 1 |
hindlimb zeugopod muscle | 2.58e-34 | 1 |
paired limb/fin | 2.58e-34 | 1 |
limb | 2.58e-34 | 1 |
pelvic appendage | 2.58e-34 | 1 |
limb segment | 2.58e-34 | 1 |
paired limb/fin segment | 2.58e-34 | 1 |
limb muscle | 2.58e-34 | 1 |
pelvic complex muscle | 2.58e-34 | 1 |
zeugopod | 2.58e-34 | 1 |
muscle of leg | 2.58e-34 | 1 |
paired limb/fin bud | 2.58e-34 | 1 |
limb bud | 2.58e-34 | 1 |
pelvic appendage bud | 2.58e-34 | 1 |
limb/fin field | 2.58e-34 | 1 |
subdivision of organism along appendicular axis | 2.58e-34 | 1 |
appendage girdle complex | 2.58e-34 | 1 |
leg | 2.58e-34 | 1 |
hindlimb | 2.58e-34 | 1 |
triceps surae | 2.58e-34 | 1 |
hindlimb zeugopod | 2.58e-34 | 1 |
posterior region of body | 2.58e-34 | 1 |
pelvic complex | 2.58e-34 | 1 |
limb field | 2.58e-34 | 1 |
hindlimb/pelvic fin field | 2.58e-34 | 1 |
heart left ventricle | 5.05e-34 | 1 |
cardiac ventricle | 5.05e-34 | 1 |
future cardiac ventricle | 5.05e-34 | 1 |
muscle structure | 6.48e-18 | 2 |
muscle organ | 6.48e-18 | 2 |
cardiac chamber | 2.59e-12 | 3 |