FFCP PHASE1:Hg19::chr9:135458021..135458030,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56751 | |EntrezGene=56751 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=953 | |HGNC=953 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T6V2 | |UniProt=Q5T6V2 | ||
|association_with_transcript=-15bp_to_ENST00000542090_5end | |association_with_transcript=-15bp_to_ENST00000542090_5end | ||
|cluster_id=chr9:135458021..135458030,+ | |||
|coexpression_cluster_id=C275 | |||
|description=CAGE_peak_6_at_BARHL1_5end | |description=CAGE_peak_6_at_BARHL1_5end | ||
|id=chr9:135458021..135458030,+ | |id=chr9:135458021..135458030,+ | ||
|ontology_enrichment_celltype=CL:0000242!9.40e-14!2 | |ontology_enrichment_celltype=CL:0000242!9.40e-14!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!1.61e-51!12;UBERON:0002028!1.61e-51!12;UBERON:0007277!1.61e-51!12;UBERON:0004732!1.34e-47!13;UBERON:0002680!2.27e-44!9;UBERON:0001895!2.27e-44!9;UBERON:0010092!2.27e-44!9;UBERON:0003076!2.51e-41!15;UBERON:0003057!2.51e-41!15;UBERON:0000988!7.70e-34!3;UBERON:0002298!2.38e-28!8;UBERON:0007190!5.93e-26!1;UBERON:0002037!1.22e-17!6;UBERON:0006215!1.22e-17!6;UBERON:0001049!1.70e-15!57;UBERON:0005068!1.70e-15!57;UBERON:0006241!1.70e-15!57;UBERON:0007135!1.70e-15!57;UBERON:0002616!5.51e-15!59;UBERON:0002148!1.55e-13!2;UBERON:0009662!1.55e-13!2;UBERON:0000955!1.10e-12!69;UBERON:0006238!1.10e-12!69;UBERON:0001017!9.77e-11!82;UBERON:0003075!2.28e-10!86;UBERON:0007284!2.28e-10!86;UBERON:0005743!2.98e-10!86;UBERON:0002346!6.47e-10!90;UBERON:0001896!1.67e-09!3;UBERON:0005290!1.67e-09!3;UBERON:0010096!1.67e-09!3;UBERON:0006331!1.81e-09!3;UBERON:0000073!2.64e-09!94;UBERON:0001016!2.64e-09!94;UBERON:0007023!7.50e-08!115;UBERON:0000033!3.19e-07!123;UBERON:0004121!4.76e-07!169;UBERON:0000153!6.86e-07!129;UBERON:0007811!6.86e-07!129;UBERON:0000924!6.94e-07!173;UBERON:0006601!6.94e-07!173 | |ontology_enrichment_uberon=UBERON:0004733!1.61e-51!12;UBERON:0002028!1.61e-51!12;UBERON:0007277!1.61e-51!12;UBERON:0004732!1.34e-47!13;UBERON:0002680!2.27e-44!9;UBERON:0001895!2.27e-44!9;UBERON:0010092!2.27e-44!9;UBERON:0003076!2.51e-41!15;UBERON:0003057!2.51e-41!15;UBERON:0000988!7.70e-34!3;UBERON:0002298!2.38e-28!8;UBERON:0007190!5.93e-26!1;UBERON:0002037!1.22e-17!6;UBERON:0006215!1.22e-17!6;UBERON:0001049!1.70e-15!57;UBERON:0005068!1.70e-15!57;UBERON:0006241!1.70e-15!57;UBERON:0007135!1.70e-15!57;UBERON:0002616!5.51e-15!59;UBERON:0002148!1.55e-13!2;UBERON:0009662!1.55e-13!2;UBERON:0000955!1.10e-12!69;UBERON:0006238!1.10e-12!69;UBERON:0001017!9.77e-11!82;UBERON:0003075!2.28e-10!86;UBERON:0007284!2.28e-10!86;UBERON:0005743!2.98e-10!86;UBERON:0002346!6.47e-10!90;UBERON:0001896!1.67e-09!3;UBERON:0005290!1.67e-09!3;UBERON:0010096!1.67e-09!3;UBERON:0006331!1.81e-09!3;UBERON:0000073!2.64e-09!94;UBERON:0001016!2.64e-09!94;UBERON:0007023!7.50e-08!115;UBERON:0000033!3.19e-07!123;UBERON:0004121!4.76e-07!169;UBERON:0000153!6.86e-07!129;UBERON:0007811!6.86e-07!129;UBERON:0000924!6.94e-07!173;UBERON:0006601!6.94e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0000988;2.39e-66;3!UBERON:0002298;4.27e-34;6!UBERON:0002680;2.62e-23;9!UBERON:0001895;2.62e-23;9!UBERON:0004733;6.76e-18;12!UBERON:0002028;6.76e-18;12!UBERON:0004732;1.21e-16;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,2.39e-66,3;UBERON:0002298,4.27e-34,6;UBERON:0002680,2.62e-23,9;UBERON:0001895,2.62e-23,9;UBERON:0010092,2.62e-23,9;UBERON:0004733,6.76e-18,12;UBERON:0002028,6.76e-18,12;UBERON:0007277,6.76e-18,12;UBERON:0004732,1.21e-16,13;UBERON:0003076,1.22e-14,15;UBERON:0003057,1.22e-14,15 | |||
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|short_description=p6@BARHL1 | |short_description=p6@BARHL1 | ||
}} | }} |
Latest revision as of 04:25, 16 September 2015
Short description: | p6@BARHL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BARHL1_5end |
Coexpression cluster: | C275_pons_medulla_cerebellum_locus_thalamus_diencephalon_spinal |
Association with transcript: | -15bp_to_ENST00000542090_5end |
EntrezGene: | BARHL1 |
HGNC: | 953 |
UniProt: | Q5T6V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pons | 2.39e-66 | 3 |
brainstem | 4.27e-34 | 6 |
regional part of metencephalon | 2.62e-23 | 9 |
metencephalon | 2.62e-23 | 9 |
future metencephalon | 2.62e-23 | 9 |
segmental subdivision of hindbrain | 6.76e-18 | 12 |
hindbrain | 6.76e-18 | 12 |
presumptive hindbrain | 6.76e-18 | 12 |
segmental subdivision of nervous system | 1.21e-16 | 13 |
posterior neural tube | 1.22e-14 | 15 |
chordal neural plate | 1.22e-14 | 15 |