FFCP PHASE1:Hg19::chr20:3780693..3780714,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:3780693..3780714,+
|short_description=p17@CDC25B
|description=CAGE_peak_17_at_CDC25B_5end
|association_with_transcript=-2bp_to_uc002wjq.2_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=994 | |EntrezGene=994 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1726 | |HGNC=1726 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_uc002wjq.2_5end | |||
|cluster_id=chr20:3780693..3780714,+ | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_17_at_CDC25B_5end | |||
|id=chr20:3780693..3780714,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.02e-29!24;CL:0000826!1.02e-29!24;CL:0000236!4.14e-14!14;CL:0000838!1.50e-11!52;CL:0000542!2.93e-11!53;CL:0000051!2.93e-11!53;CL:0000242!1.02e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.06e-15;13!CL:0002553;3.50e-14;1!CL:0000167;1.18e-13;1!CL:0000164;1.18e-13;1!CL:0000502;1.18e-13;1!CL:0000172;1.18e-13;1!CL:0000173;1.18e-13;1!CL:0000945;1.83e-08;24!CL:0000123;1.81e-07;2!CL:0000242;1.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.15e-14,14;CL:0002553,3.50e-14,1;CL:0000167,1.10e-13,1;CL:0000164,1.10e-13,1;CL:0000502,1.10e-13,1;CL:0000172,1.10e-13,1;CL:0000173,1.10e-13,1;CL:0002351,1.10e-13,1;CL:0000945,1.69e-08,24;CL:0000826,1.69e-08,24;CL:0000242,2.40e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.08e-37;3!CL:0002351;1.18e-13;1 | |||
|ontology_enrichment_disease=DOID:0060058!3.14e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.18e-13;1!DOID:3119;9.07e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.10e-13,1;DOID:3119,9.07e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002037!3.32e-09!6;UBERON:0006215!3.32e-09!6;UBERON:0000007!7.88e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.20e-19;6!UBERON:0002680;4.99e-13;9!UBERON:0001895;4.99e-13;9!UBERON:0004733;6.47e-10;12!UBERON:0002028;6.47e-10;12!UBERON:0004732;3.40e-09;13!UBERON:0000007;1.05e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.49e-19,6;UBERON:0006215,2.49e-19,6;UBERON:0002680,4.23e-13,9;UBERON:0001895,4.23e-13,9;UBERON:0010092,4.23e-13,9;UBERON:0004733,5.73e-10,12;UBERON:0002028,5.73e-10,12;UBERON:0007277,5.73e-10,12;UBERON:0004732,3.04e-09,13;UBERON:0003076,4.43e-08,15;UBERON:0003057,4.43e-08,15;UBERON:0000007,1.05e-07,2 | |||
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| ||
|short_description=p17@CDC25B | |||
}} | }} |
Latest revision as of 04:31, 16 September 2015
Short description: | p17@CDC25B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_CDC25B_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | -2bp_to_uc002wjq.2_5end |
EntrezGene: | CDC25B |
HGNC: | 1726 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.15e-14 | 14 |
lung fibroblast | 3.50e-14 | 1 |
peptide hormone secreting cell | 1.10e-13 | 1 |
enteroendocrine cell | 1.10e-13 | 1 |
type D enteroendocrine cell | 1.10e-13 | 1 |
somatostatin secreting cell | 1.10e-13 | 1 |
pancreatic D cell | 1.10e-13 | 1 |
progenitor cell of endocrine pancreas | 1.10e-13 | 1 |
lymphocyte of B lineage | 1.69e-08 | 24 |
pro-B cell | 1.69e-08 | 24 |
Merkel cell | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.49e-19 | 6 |
rhombic lip | 2.49e-19 | 6 |
regional part of metencephalon | 4.23e-13 | 9 |
metencephalon | 4.23e-13 | 9 |
future metencephalon | 4.23e-13 | 9 |
segmental subdivision of hindbrain | 5.73e-10 | 12 |
hindbrain | 5.73e-10 | 12 |
presumptive hindbrain | 5.73e-10 | 12 |
segmental subdivision of nervous system | 3.04e-09 | 13 |
posterior neural tube | 4.43e-08 | 15 |
chordal neural plate | 4.43e-08 | 15 |
pituitary gland | 1.05e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.10e-13 | 1 |
gastrointestinal system cancer | 9.07e-09 | 14 |