FFCP PHASE1:Hg19::chr20:3869999..3870018,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80025 | |EntrezGene=80025 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15894 | |HGNC=15894 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000336066_5end | |association_with_transcript=-17bp_to_ENST00000336066_5end | ||
|cluster_id=chr20:3869999..3870018,+ | |||
|description=CAGE_peak_2_at_PANK2_5end | |description=CAGE_peak_2_at_PANK2_5end | ||
|id=chr20:3869999..3870018,+ | |id=chr20:3869999..3870018,+ | ||
|ontology_enrichment_celltype=CL:0000738!6.24e-16!140;CL:0000838!4.49e-15!52;CL:0000542!2.23e-14!53;CL:0000051!2.23e-14!53;CL:0000037!1.18e-13!172;CL:0000566!1.18e-13!172;CL:0002031!9.28e-13!124;CL:0002032!3.52e-12!165;CL:0000837!3.52e-12!165;CL:0000988!4.29e-12!182;CL:0002087!1.66e-10!119;CL:0000084!1.76e-08!25;CL:0000827!1.76e-08!25;CL:0000791!3.82e-08!18;CL:0000789!3.82e-08!18;CL:0002420!3.82e-08!18;CL:0002419!3.82e-08!18;CL:0000790!3.82e-08!18 | |ontology_enrichment_celltype=CL:0000738!6.24e-16!140;CL:0000838!4.49e-15!52;CL:0000542!2.23e-14!53;CL:0000051!2.23e-14!53;CL:0000037!1.18e-13!172;CL:0000566!1.18e-13!172;CL:0002031!9.28e-13!124;CL:0002032!3.52e-12!165;CL:0000837!3.52e-12!165;CL:0000988!4.29e-12!182;CL:0002087!1.66e-10!119;CL:0000084!1.76e-08!25;CL:0000827!1.76e-08!25;CL:0000791!3.82e-08!18;CL:0000789!3.82e-08!18;CL:0002420!3.82e-08!18;CL:0002419!3.82e-08!18;CL:0000790!3.82e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000542;3.49e-09;53!CL:0000084;7.87e-09;25!CL:0000791;5.40e-08;18!CL:0000789;5.40e-08;18!CL:0002419;5.40e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.88e-17,136;CL:0000838,4.48e-15,52;CL:0000037,7.38e-15,168;CL:0000542,2.23e-14,53;CL:0000051,2.23e-14,53;CL:0002031,3.68e-14,120;CL:0000988,1.21e-13,177;CL:0002032,2.52e-13,161;CL:0000837,2.52e-13,161;CL:0002087,9.10e-12,115;CL:0000084,1.76e-08,25;CL:0000827,1.76e-08,25;CL:0000791,3.81e-08,18;CL:0000789,3.81e-08,18;CL:0002420,3.81e-08,18;CL:0002419,3.81e-08,18;CL:0000790,3.81e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000051;3.49e-09;53!CL:0000790;5.40e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@PANK2 | |short_description=p2@PANK2 | ||
}} | }} |
Latest revision as of 04:44, 16 September 2015
Short description: | p2@PANK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PANK2_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000336066_5end |
EntrezGene: | PANK2 |
HGNC: | 15894 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.88e-17 | 136 |
lymphoid lineage restricted progenitor cell | 4.48e-15 | 52 |
hematopoietic stem cell | 7.38e-15 | 168 |
lymphocyte | 2.23e-14 | 53 |
common lymphoid progenitor | 2.23e-14 | 53 |
hematopoietic lineage restricted progenitor cell | 3.68e-14 | 120 |
hematopoietic cell | 1.21e-13 | 177 |
hematopoietic oligopotent progenitor cell | 2.52e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.52e-13 | 161 |
nongranular leukocyte | 9.10e-12 | 115 |
T cell | 1.76e-08 | 25 |
pro-T cell | 1.76e-08 | 25 |
mature alpha-beta T cell | 3.81e-08 | 18 |
alpha-beta T cell | 3.81e-08 | 18 |
immature T cell | 3.81e-08 | 18 |
mature T cell | 3.81e-08 | 18 |
immature alpha-beta T cell | 3.81e-08 | 18 |