FFCP PHASE1:Hg19::chr3:154797877..154797889,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4311 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7154 | |||
|TSSclassifier=strong | |||
|UniProt=P08473 | |||
|association_with_transcript=0bp_to_ENST00000462745_5end | |||
|cluster_id=chr3:154797877..154797889,+ | |||
|coexpression_cluster_id=C2729 | |||
|description=CAGE_peak_12_at_MME_5end | |||
|id=chr3:154797877..154797889,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.13e-15!180;CL:0000136!4.72e-11!15;CL:0000057!5.96e-11!75;CL:0000680!2.18e-08!57;CL:0000056!2.18e-08!57;CL:0000355!2.18e-08!57;CL:0002620!3.81e-08!23;CL:0000187!4.40e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.69e-17;13!CL:0000680;1.93e-09;7!CL:0002620;3.30e-08;23!CL:0002551;7.81e-08;6!CL:0000188;4.00e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.20e-19,15;CL:0000048,3.04e-10,427;CL:0000723,9.41e-10,433;CL:0000034,3.99e-09,441;CL:0000680,1.65e-08,58;CL:0000056,1.65e-08,58;CL:0000355,1.65e-08,58;CL:0002620,6.32e-08,23;CL:0002551,1.22e-07,6;CL:0000188,3.38e-07,9;CL:0000057,8.01e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.43e-12!83;UBERON:0002329!2.43e-12!83;UBERON:0003077!2.43e-12!83;UBERON:0003059!2.43e-12!83;UBERON:0007282!2.43e-12!83;UBERON:0009618!2.43e-12!83;UBERON:0007285!2.43e-12!83;UBERON:0004290!3.66e-11!70;UBERON:0005256!9.55e-10!143;UBERON:0002100!1.54e-09!216;UBERON:0003102!3.95e-09!95;UBERON:0002385!4.74e-09!63;UBERON:0001015!4.74e-09!63;UBERON:0000383!4.74e-09!63;UBERON:0001134!7.59e-09!61;UBERON:0002036!7.59e-09!61;UBERON:0003082!7.59e-09!61;UBERON:0000486!9.31e-09!82;UBERON:0000475!1.24e-07!365;UBERON:0002199!5.83e-07!45;UBERON:0002416!5.83e-07!45;UBERON:0003104!7.61e-07!238;UBERON:0009142!7.61e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;7.73e-08;31!UBERON:0001015;7.73e-08;31!UBERON:0000383;7.73e-08;31!UBERON:0001013;1.57e-07;14!UBERON:0001134;4.05e-07;16!UBERON:0002036;4.05e-07;16!UBERON:0002067;9.17e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,2.92e-11,71;UBERON:0003059,2.92e-11,71;UBERON:0007282,2.92e-11,71;UBERON:0004290,2.92e-11,71;UBERON:0009618,2.92e-11,71;UBERON:0003077,5.53e-11,72;UBERON:0007285,5.53e-11,72;UBERON:0007524,1.03e-10,73;UBERON:0007503,1.74e-09,78;UBERON:0000486,4.42e-09,83;UBERON:0002199,4.57e-09,46;UBERON:0002416,4.57e-09,46;UBERON:0005256,1.09e-08,122;UBERON:0002385,4.69e-08,64;UBERON:0001015,4.69e-08,64;UBERON:0000383,4.69e-08,64;UBERON:0001134,1.50e-07,62;UBERON:0002036,1.50e-07,62;UBERON:0003082,1.50e-07,62;UBERON:0001013,2.12e-07,14;UBERON:0002097,3.60e-07,41;UBERON:0002100,8.04e-07,199 | |||
|phase1_expression=4.36028110249336,19.0549466262975,2.39622486963151,5.00366491765652,4.46961094427288,0,17.7309914717817,11.370957721683,19.5889221149879,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,1.34465029290355,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0,0,0,0,0,0,0.221729397462564,0,3.79839318943367,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,3.83986624358335,2.29469296599051,0.354668382198357,0,0,0,0.933633106199299,0.942974704487816,1.14423332179421,0,0,1.17160715916898,8.42832207441865,1.71141546463335,5.82849854152024,1.05691048779388,1.13311061057692,1.12360645361799,0.61246251376468,0.737005903870608,1.75653827998801,1.18800285728205,2.96720315134268,0,0,1.34668891163253,0.750711119231785,3.04770527032601,0.877955241761676,0,1.95309476578576,0.113432183160021,1.07633781413317,2.98980344345994,2.54318281391474,0,0.824420233907511,1.03056216018252,1.48893485065272,0.843881661206331,2.04617710838517,0.252433774244115,1.01254888506529,0.646584227275248,0,0.10075209822764,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,3.12899064659632,0,0,18.1103491932472,18.7688665234092,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1404027857465,5.89696330006576,5.31710916013264,0.441463099414651,0.122988438543114,0.343135620597051,0,0,0,0.0925884451585296,0.325808305310325,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0.468008530278475,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,1.96843472305724,1.90994212779139,0,3.4214489204541,0.822619941626588,3.00343057843917,1.42913216315289,0,0,0.07333828582095,0.646358578788889,3.57656445851882,0,2.92531928243358,2.08014873822732,0.771622122786426,0,0,1.28680194292333,7.05408087008876,1.64648067356154,0.977208552881205,0.710783897485092,0.791951872933429,0,0,0,0,0,0,0,0,1.42636905040718,2.17171960001369,1.84928690295345,5.55088986043676,0,0,0,0,0,0,0,0,0,2.24702107184155,2.99161459204025,5.38740167466846,0.49076596687656,0,0.271265023699736,0.207970861530807,0.535286966391485,0.315404830067869,0.35142424497814,3.00946099727719,2.27407504055985,2.0694614258501,0,0.184369168541703,8.51459421787212,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0.248107807818777,5.83155498494637,3.92924132206303,0.768834895534206,1.53512174720011,0,0,0.308419387605311,0.177561725313127,0.410635780069046,0,0.232420756919918,0.120859449591622,0.200506470303285,0.276242966807689,0.918515585316854,1.27463817604702,1.57349297951309,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,6.38854272215878,0.0915694648183434,0.660075999364704,0,0,0,0.96670718292122,3.08097234229289,2.45605879561807,2.48105830472155,7.51941714077915,6.38073453222605,1.78975917573812,0.267096106940212,0,0,0,0,0.929691098594572,4.40737285562896,0,0,0,0.869932992075073,0,0.143124886741991,1.116475108079,4.11293252134344,2.85945290885737,0.255897791311334,8.13084077264449,0,0,3.59744915166629,3.84351841630477,1.06031162111118,0.202182481573316,0,0,0,1.21856744815642,0,0.545999645631943,1.27264888758341,0,0.551365343546124,0,0,1.15755106853338,4.59126326432643,0.405820753925408,0,0,3.44187245289724,9.53015697827275,0,0.709522128141196,0,0,0,0.349934720244983,0,0,0,7.15492885903522,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0,0,0,1.58625035258854,0.427296284509893,0,0,0,6.20357615798713,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8347699159725,0.36408156524854,0,0,1.67121139316383,0,0.614321404198464,0,0,3.33926115068718,0,0,0.398495976502139,0.276283915531148,0.755798243562828,0,0,0,0.179736702294654,0,0,0,0,0,1.93866549219044,0,0,0,0,2.17499872630438,0,1.27126825146383,0.472775363535873,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0.455768223388005,0,0,0,1.91400695839152,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.1058007035894,6.11030144933625,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0.91227394607833,0.19566461893209,0,0,19.3585145677862,0,0.31593289814244,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0.685209623233754,0.397429223405979,0,0,0.160317640503067,5.76323085796252,0.19980960958213,0,0,0,0,0.124252535565433,0.235694034616795,0.407712618220842,0.523014231561666,0.305994652908965,0,0,0,0,0.429765441419957,0,0,0.687481272035051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.45668487590378,4.93073128468982,0,0,0.767660789277781,1.42939065274673,0,0,0,0,0,0,0,0.511164065356265,0,3.66380584195206,0,0,0,0,0,0.747511887973863,0,0.828478110694391,0.496166021811951,0,0,0,14.6884806909758,18.8017420517025,17.1553522987538,25.5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| |||
|short_description=p12@MME | |||
}} |
Latest revision as of 04:48, 16 September 2015
Short description: | p12@MME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_MME_5end |
Coexpression cluster: | C2729_small_colon_mature_Hair_Adipocyte_temporal_duodenum |
Association with transcript: | 0bp_to_ENST00000462745_5end |
EntrezGene: | MME |
HGNC: | 7154 |
UniProt: | P08473 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.20e-19 | 15 |
multi fate stem cell | 3.04e-10 | 427 |
somatic stem cell | 9.41e-10 | 433 |
stem cell | 3.99e-09 | 441 |
muscle precursor cell | 1.65e-08 | 58 |
myoblast | 1.65e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.65e-08 | 58 |
skin fibroblast | 6.32e-08 | 23 |
fibroblast of dermis | 1.22e-07 | 6 |
cell of skeletal muscle | 3.38e-07 | 9 |
fibroblast | 8.01e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
somite | 2.92e-11 | 71 |
presomitic mesoderm | 2.92e-11 | 71 |
presumptive segmental plate | 2.92e-11 | 71 |
dermomyotome | 2.92e-11 | 71 |
trunk paraxial mesoderm | 2.92e-11 | 71 |
paraxial mesoderm | 5.53e-11 | 72 |
presumptive paraxial mesoderm | 5.53e-11 | 72 |
dense mesenchyme tissue | 1.03e-10 | 73 |
epithelial vesicle | 1.74e-09 | 78 |
multilaminar epithelium | 4.42e-09 | 83 |
integument | 4.57e-09 | 46 |
integumental system | 4.57e-09 | 46 |
trunk mesenchyme | 1.09e-08 | 122 |
muscle tissue | 4.69e-08 | 64 |
musculature | 4.69e-08 | 64 |
musculature of body | 4.69e-08 | 64 |
skeletal muscle tissue | 1.50e-07 | 62 |
striated muscle tissue | 1.50e-07 | 62 |
myotome | 1.50e-07 | 62 |
adipose tissue | 2.12e-07 | 14 |
skin of body | 3.60e-07 | 41 |
trunk | 8.04e-07 | 199 |