FFCP PHASE1:Hg19::chr5:149865474..149865509,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:149865474..149865509,+
|short_description=p1@NDST1
|description=CAGE_peak_1_at_NDST1_5end
|association_with_transcript=93bp_to_ENST00000522491_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3340 | |EntrezGene=3340 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7680 | |HGNC=7680 | ||
|TSSclassifier=strong | |||
|UniProt=E5RGN9 | |UniProt=E5RGN9 | ||
|association_with_transcript=93bp_to_ENST00000522491_5end | |||
|cluster_id=chr5:149865474..149865509,+ | |||
|description=CAGE_peak_1_at_NDST1_5end | |||
|id=chr5:149865474..149865509,+ | |||
|ontology_enrichment_celltype=CL:0002371!3.60e-26!591;CL:0000144!7.83e-25!625;CL:0000222!2.15e-20!119;CL:0000055!8.85e-20!180;CL:0000220!2.52e-17!246;CL:0002321!1.36e-16!248;CL:0000057!7.61e-15!75;CL:0000548!6.59e-14!679;CL:0000004!6.59e-14!679;CL:0000255!6.59e-14!679;CL:0000012!3.99e-13!682;CL:0000183!4.59e-12!59;CL:0000680!3.02e-11!57;CL:0000056!3.02e-11!57;CL:0000355!3.02e-11!57;CL:0000192!6.05e-11!42;CL:0000514!6.05e-11!42;CL:0000187!7.85e-11!54;CL:0000213!3.31e-10!57;CL:0000215!3.31e-10!57;CL:0000359!3.73e-09!32;CL:0000115!4.10e-09!35;CL:0000048!4.71e-09!430;CL:0002078!9.92e-09!44;CL:0000723!1.15e-08!436;CL:0002139!2.26e-08!24;CL:0000071!3.60e-08!18;CL:0002546!3.60e-08!18;CL:0000393!1.15e-07!60;CL:0000211!1.15e-07!60;CL:0000034!3.22e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.18e-08;32!CL:0002139;2.18e-08;24!CL:0000071;3.67e-08;18!CL:0000192;4.14e-08;43!CL:0000115;4.31e-08;36!CL:0000213;8.92e-07;58!CL:0000215;8.92e-07;58!CL:0000134;9.41e-07;55!CL:0002334;9.95e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.56e-21,121;CL:0002321,1.59e-16,250;CL:0000057,4.81e-15,76;CL:0000680,3.47e-11,58;CL:0000056,3.47e-11,58;CL:0000355,3.47e-11,58;CL:0000192,7.73e-11,43;CL:0000514,7.73e-11,43;CL:0000187,9.11e-11,55;CL:0000213,1.31e-10,58;CL:0000215,1.31e-10,58;CL:0000048,8.48e-10,427;CL:0000115,1.55e-09,36;CL:0000723,2.05e-09,433;CL:0000359,3.47e-09,32;CL:0002078,3.96e-09,45;CL:0002139,2.12e-08,24;CL:0000071,3.38e-08,18;CL:0002546,3.38e-08,18;CL:0000034,6.90e-08,441;CL:0000393,2.24e-07,61;CL:0000211,2.24e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002546;3.67e-08;18!CL:0000514;4.14e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!5.22e-20!84;UBERON:0002049!7.94e-19!79;UBERON:0007798!7.94e-19!79;UBERON:0003914!9.07e-18!118;UBERON:0000055!3.04e-17!69;UBERON:0004535!3.08e-17!110;UBERON:0001981!1.03e-16!60;UBERON:0007500!1.03e-16!60;UBERON:0004537!1.03e-16!60;UBERON:0006965!1.03e-16!60;UBERON:0001009!1.79e-16!113;UBERON:0000467!9.74e-16!625;UBERON:0000480!1.30e-15!626;UBERON:0000468!1.34e-15!659;UBERON:0000926!2.64e-14!448;UBERON:0004120!2.64e-14!448;UBERON:0006603!2.64e-14!448;UBERON:0001637!2.29e-13!42;UBERON:0003509!2.29e-13!42;UBERON:0004572!2.29e-13!42;UBERON:0000486!3.32e-13!82;UBERON:0003081!4.80e-13!216;UBERON:0005256!5.59e-13!143;UBERON:0000914!1.05e-12!83;UBERON:0002329!1.05e-12!83;UBERON:0003077!1.05e-12!83;UBERON:0003059!1.05e-12!83;UBERON:0007282!1.05e-12!83;UBERON:0009618!1.05e-12!83;UBERON:0007285!1.05e-12!83;UBERON:0000490!3.02e-12!138;UBERON:0004290!1.85e-11!70;UBERON:0002100!3.58e-11!216;UBERON:0004573!2.12e-10!33;UBERON:0004571!2.12e-10!33;UBERON:0001134!6.51e-10!61;UBERON:0002036!6.51e-10!61;UBERON:0003082!6.51e-10!61;UBERON:0002385!1.35e-09!63;UBERON:0001015!1.35e-09!63;UBERON:0000383!1.35e-09!63;UBERON:0000923!1.43e-09!604;UBERON:0005291!1.43e-09!604;UBERON:0006598!1.43e-09!604;UBERON:0002532!1.43e-09!604;UBERON:0002050!1.46e-09!605;UBERON:0005423!1.46e-09!605;UBERON:0000475!3.83e-09!365;UBERON:0000922!1.90e-08!612;UBERON:0000119!2.24e-08!312;UBERON:0003102!3.00e-08!95;UBERON:0001986!3.60e-08!18;UBERON:0004638!3.60e-08!18;UBERON:0004852!3.60e-08!18;UBERON:0000483!5.45e-08!309;UBERON:0006914!7.69e-08!25;UBERON:0000487!1.05e-07!22;UBERON:0002204!2.96e-07!167;UBERON:0000947!4.59e-07!21;UBERON:0010191!4.59e-07!21;UBERON:0004923!5.75e-07!57;UBERON:0002199!8.59e-07!45;UBERON:0002416!8.59e-07!45;UBERON:0000479!8.97e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;2.59e-10;56!UBERON:0001981;2.59e-10;56!UBERON:0004537;2.59e-10;56!UBERON:0001637;3.45e-10;42!UBERON:0003509;3.45e-10;42!UBERON:0004572;3.45e-10;42!UBERON:0004573;1.73e-09;33!UBERON:0004571;1.73e-09;33!UBERON:0000055;5.84e-09;65!UBERON:0003914;1.88e-08;74!UBERON:0002049;3.16e-08;75!UBERON:0007798;3.16e-08;75!UBERON:0004638;3.67e-08;18!UBERON:0001986;3.67e-08;18!UBERON:0004852;3.67e-08;18!UBERON:0006914;1.06e-07;25!UBERON:0000487;1.45e-07;22!UBERON:0000947;5.10e-07;21!UBERON:0010191;5.10e-07;21 | |||
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| ||
|short_description=p1@NDST1 | |||
}} | }} |
Latest revision as of 05:02, 16 September 2015
Short description: | p1@NDST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NDST1_5end |
Coexpression cluster: | NA |
Association with transcript: | 93bp_to_ENST00000522491_5end |
EntrezGene: | NDST1 |
HGNC: | 7680 |
UniProt: | E5RGN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.56e-21 | 121 |
embryonic cell | 1.59e-16 | 250 |
fibroblast | 4.81e-15 | 76 |
muscle precursor cell | 3.47e-11 | 58 |
myoblast | 3.47e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.47e-11 | 58 |
smooth muscle cell | 7.73e-11 | 43 |
smooth muscle myoblast | 7.73e-11 | 43 |
muscle cell | 9.11e-11 | 55 |
lining cell | 1.31e-10 | 58 |
barrier cell | 1.31e-10 | 58 |
multi fate stem cell | 8.48e-10 | 427 |
endothelial cell | 1.55e-09 | 36 |
somatic stem cell | 2.05e-09 | 433 |
vascular associated smooth muscle cell | 3.47e-09 | 32 |
meso-epithelial cell | 3.96e-09 | 45 |
endothelial cell of vascular tree | 2.12e-08 | 24 |
blood vessel endothelial cell | 3.38e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.38e-08 | 18 |
stem cell | 6.90e-08 | 441 |
electrically responsive cell | 2.24e-07 | 61 |
electrically active cell | 2.24e-07 | 61 |