FFCP PHASE1:Hg19::chr2:238969728..238969752,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:238969728..238969752,+ to FFCP PHASE1:Hg19::chr2:238969728..238969752,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51540 | |EntrezGene=51540 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18161 | |HGNC=18161 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000416757_5end | |||
|cluster_id=chr2:238969728..238969752,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_SCLY_5end | |||
|id=chr2:238969728..238969752,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.92e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.86e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.38e-09,253;CL:0000148,1.89e-08,10;CL:0000541,1.89e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.89e-07;11 | |||
|ontology_enrichment_disease=DOID:162!3.03e-08!235;DOID:14566!2.38e-07!239;DOID:0050687!8.78e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.75e-10,235;DOID:14566,1.31e-09,239;DOID:0050687,1.08e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.16e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.31e-14;9!UBERON:0001557;1.31e-14;9!UBERON:0000072;3.88e-08;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.45e-15,9;UBERON:0008947,2.97e-07,38;UBERON:0003258,2.97e-07,38 | |||
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| ||
|short_description=p3@SCLY | |||
}} | }} |
Latest revision as of 05:27, 16 September 2015
Short description: | p3@SCLY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCLY_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000416757_5end |
EntrezGene: | SCLY |
HGNC: | 18161 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.38e-09 | 253 |
melanocyte | 1.89e-08 | 10 |
melanoblast | 1.89e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.45e-15 | 9 |
respiratory primordium | 2.97e-07 | 38 |
endoderm of foregut | 2.97e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.75e-10 | 235 |
disease of cellular proliferation | 1.31e-09 | 239 |
cell type cancer | 1.08e-07 | 143 |