FFCP PHASE1:Hg19::chr12:9822355..9822366,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29121 | |EntrezGene=29121 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14351 | |HGNC=14351 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=46bp_to_uc001qwh.1,uc009zgs.1,uc009zgt.1_5end | |association_with_transcript=46bp_to_uc001qwh.1,uc009zgs.1,uc009zgt.1_5end | ||
|cluster_id=chr12:9822355..9822366,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_3_at_CLEC2D_5end | |description=CAGE_peak_3_at_CLEC2D_5end | ||
|id=chr12:9822355..9822366,+ | |id=chr12:9822355..9822366,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.59e-62!53;CL:0000051!1.59e-62!53;CL:0000838!3.12e-61!52;CL:0000738!7.59e-47!140;CL:0002087!8.28e-45!119;CL:0002031!2.08e-37!124;CL:0000988!1.30e-36!182;CL:0000037!5.10e-36!172;CL:0000566!5.10e-36!172;CL:0002032!1.07e-33!165;CL:0000837!1.07e-33!165;CL:0000945!4.24e-31!24;CL:0000826!4.24e-31!24;CL:0000084!1.24e-26!25;CL:0000827!1.24e-26!25;CL:0000791!7.46e-26!18;CL:0000789!7.46e-26!18;CL:0002420!7.46e-26!18;CL:0002419!7.46e-26!18;CL:0000790!7.46e-26!18;CL:0000236!1.16e-19!14;CL:0000625!2.88e-16!11;CL:0000624!3.73e-10!6;CL:0000080!2.52e-09!6 | |ontology_enrichment_celltype=CL:0000542!1.59e-62!53;CL:0000051!1.59e-62!53;CL:0000838!3.12e-61!52;CL:0000738!7.59e-47!140;CL:0002087!8.28e-45!119;CL:0002031!2.08e-37!124;CL:0000988!1.30e-36!182;CL:0000037!5.10e-36!172;CL:0000566!5.10e-36!172;CL:0002032!1.07e-33!165;CL:0000837!1.07e-33!165;CL:0000945!4.24e-31!24;CL:0000826!4.24e-31!24;CL:0000084!1.24e-26!25;CL:0000827!1.24e-26!25;CL:0000791!7.46e-26!18;CL:0000789!7.46e-26!18;CL:0002420!7.46e-26!18;CL:0002419!7.46e-26!18;CL:0000790!7.46e-26!18;CL:0000236!1.16e-19!14;CL:0000625!2.88e-16!11;CL:0000624!3.73e-10!6;CL:0000080!2.52e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.68e-45;53!CL:0000791;4.35e-38;18!CL:0000789;4.35e-38;18!CL:0002419;4.35e-38;18!CL:0000084;6.38e-37;25!CL:0000945;5.06e-33;24!CL:0000236;3.54e-27;13!CL:0000625;1.33e-23;11!CL:0000624;1.73e-14;6!CL:0002087;8.41e-14;104!CL:0000898;2.48e-08;3!CL:0000623;1.91e-07;3!CL:0000738;3.52e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.87e-78,53;CL:0000051,6.87e-78,53;CL:0000838,5.72e-76,52;CL:0000791,2.70e-38,18;CL:0000789,2.70e-38,18;CL:0002420,2.70e-38,18;CL:0002419,2.70e-38,18;CL:0000790,2.70e-38,18;CL:0002087,5.41e-38,115;CL:0000084,4.37e-37,25;CL:0000827,4.37e-37,25;CL:0000738,7.13e-36,136;CL:0000945,5.31e-33,24;CL:0000826,5.31e-33,24;CL:0000988,9.76e-31,177;CL:0002031,1.62e-29,120;CL:0000236,6.59e-29,14;CL:0000037,8.73e-29,168;CL:0002032,8.80e-27,161;CL:0000837,8.80e-27,161;CL:0000625,9.07e-24,11;CL:0000624,1.57e-14,6;CL:0000898,2.42e-08,3;CL:0000623,1.85e-07,3;CL:0000825,1.85e-07,3;CL:0000817,2.42e-07,3;CL:0000226,8.21e-07,3;CL:0000842,8.21e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.68e-45;53!CL:0000790;4.35e-38;18 | |||
|ontology_enrichment_disease=DOID:0060058!1.80e-11!10 | |ontology_enrichment_disease=DOID:0060058!1.80e-11!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;5.30e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.54e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.30e-16!15;UBERON:0000179!2.30e-16!15;UBERON:0000463!2.30e-16!15;UBERON:0002390!2.19e-11!102;UBERON:0003061!2.19e-11!102;UBERON:0002193!7.45e-11!112;UBERON:0004177!1.08e-09!7 | |ontology_enrichment_uberon=UBERON:0000178!2.30e-16!15;UBERON:0000179!2.30e-16!15;UBERON:0000463!2.30e-16!15;UBERON:0002390!2.19e-11!102;UBERON:0003061!2.19e-11!102;UBERON:0002193!7.45e-11!112;UBERON:0004177!1.08e-09!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.88e-13;15!UBERON:0000179;7.88e-13;15!UBERON:0000463;7.88e-13;15!UBERON:0002390;7.62e-11;32!UBERON:0004177;5.15e-07;5!UBERON:0005057;5.15e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.59e-13,15;UBERON:0000179,6.59e-13,15;UBERON:0000463,6.59e-13,15;UBERON:0004177,1.35e-10,7;UBERON:0005057,1.35e-10,7;UBERON:0002370,1.33e-08,4;UBERON:0005058,1.33e-08,4;UBERON:0009113,1.33e-08,4;UBERON:0003295,1.33e-08,4;UBERON:0005562,1.33e-08,4 | |||
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|short_description=p3@CLEC2D | |short_description=p3@CLEC2D | ||
}} | }} |
Latest revision as of 05:36, 16 September 2015
Short description: | p3@CLEC2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLEC2D_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 46bp_to_uc001qwh.1, uc009zgs.1, uc009zgt.1_5end |
EntrezGene: | CLEC2D |
HGNC: | 14351 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.87e-78 | 53 |
common lymphoid progenitor | 6.87e-78 | 53 |
lymphoid lineage restricted progenitor cell | 5.72e-76 | 52 |
mature alpha-beta T cell | 2.70e-38 | 18 |
alpha-beta T cell | 2.70e-38 | 18 |
immature T cell | 2.70e-38 | 18 |
mature T cell | 2.70e-38 | 18 |
immature alpha-beta T cell | 2.70e-38 | 18 |
nongranular leukocyte | 5.41e-38 | 115 |
T cell | 4.37e-37 | 25 |
pro-T cell | 4.37e-37 | 25 |
leukocyte | 7.13e-36 | 136 |
lymphocyte of B lineage | 5.31e-33 | 24 |
pro-B cell | 5.31e-33 | 24 |
hematopoietic cell | 9.76e-31 | 177 |
hematopoietic lineage restricted progenitor cell | 1.62e-29 | 120 |
B cell | 6.59e-29 | 14 |
hematopoietic stem cell | 8.73e-29 | 168 |
hematopoietic oligopotent progenitor cell | 8.80e-27 | 161 |
hematopoietic multipotent progenitor cell | 8.80e-27 | 161 |
CD8-positive, alpha-beta T cell | 9.07e-24 | 11 |
CD4-positive, alpha-beta T cell | 1.57e-14 | 6 |
naive T cell | 2.42e-08 | 3 |
natural killer cell | 1.85e-07 | 3 |
pro-NK cell | 1.85e-07 | 3 |
precursor B cell | 2.42e-07 | 3 |
single nucleate cell | 8.21e-07 | 3 |
mononuclear cell | 8.21e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 6.59e-13 | 15 |
haemolymphatic fluid | 6.59e-13 | 15 |
organism substance | 6.59e-13 | 15 |
hemopoietic organ | 1.35e-10 | 7 |
immune organ | 1.35e-10 | 7 |
thymus | 1.33e-08 | 4 |
hemolymphoid system gland | 1.33e-08 | 4 |
thymic region | 1.33e-08 | 4 |
pharyngeal gland | 1.33e-08 | 4 |
thymus primordium | 1.33e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.54e-11 | 10 |