FFCP PHASE2:Hg19::chr10:106028923..106028956,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:119391 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:23064 |TSScl...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=119391 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=23064 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9H4Y5,B4DJW6 | ||
|association_with_transcript=292bp_to_ENST00000338595,ENST00000369708,ENST00000450629,NM_001191013,NM_183239,uc001kyb.2_5end | |association_with_transcript=292bp_to_ENST00000338595,ENST00000369708,ENST00000450629,NM_001191013,NM_183239,uc001kyb.2_5end | ||
|cluster_id=chr10:106028923..106028956,+ | |cluster_id=chr10:106028923..106028956,+ |
Latest revision as of 05:37, 16 September 2015
Short description: | p3@GSTO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GSTO2_5end |
Coexpression cluster: | NA |
Association with transcript: | 292bp_to_ENST00000338595, ENST00000369708, ENST00000450629, NM_001191013, NM_183239, uc001kyb.2_5end |
EntrezGene: | GSTO2 |
HGNC: | 23064 |
UniProt: | Q9H4Y5B4DJW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@GSTO2 |
---|
0
5
10
15
20
25
30
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 8.26e-21 | 56 |
neural rod | 8.26e-21 | 56 |
future spinal cord | 8.26e-21 | 56 |
neural keel | 8.26e-21 | 56 |
neurectoderm | 2.78e-20 | 86 |
regional part of nervous system | 1.35e-19 | 53 |
regional part of brain | 1.35e-19 | 53 |
neural plate | 4.11e-19 | 82 |
presumptive neural plate | 4.11e-19 | 82 |
pre-chordal neural plate | 6.03e-18 | 61 |
Showing 1 to 10 of 41 entries