FFCP PHASE1:Hg19::chrX:69643023..69643026,+: Difference between revisions
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|id=chrX:69643023..69643026,+
|short_description=p8@GDPD2
|description=CAGE_peak_8_at_GDPD2_5end
|association_with_transcript=32bp_to_ENST00000374382,uc004dyh.2,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54857 | |EntrezGene=54857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25974 | |HGNC=25974 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCC8 | |UniProt=Q9HCC8 | ||
|association_with_transcript=32bp_to_ENST00000374382,uc004dyh.2,uc010nkx.1,uc010nky.1,uc011mpk.1,uc011mpl.1,uc011mpm.1_5end | |||
|cluster_id=chrX:69643023..69643026,+ | |||
|description=CAGE_peak_8_at_GDPD2_5end | |||
|id=chrX:69643023..69643026,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.23e-27!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.60e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.83e-14,5 | |||
|ontology_enrichment_development_v019=UBERON:0004872;8.99e-11;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.71e-38!57;UBERON:0005068!4.71e-38!57;UBERON:0006241!4.71e-38!57;UBERON:0007135!4.71e-38!57;UBERON:0005743!8.22e-37!86;UBERON:0001017!8.08e-36!82;UBERON:0002780!1.39e-35!41;UBERON:0001890!1.39e-35!41;UBERON:0006240!1.39e-35!41;UBERON:0003080!1.16e-34!42;UBERON:0001893!6.34e-34!34;UBERON:0000073!7.44e-33!94;UBERON:0001016!7.44e-33!94;UBERON:0001869!1.23e-31!32;UBERON:0002791!1.01e-30!33;UBERON:0002616!1.10e-29!59;UBERON:0003075!1.08e-28!86;UBERON:0007284!1.08e-28!86;UBERON:0003056!1.56e-28!61;UBERON:0002346!3.37e-27!90;UBERON:0000955!4.38e-27!69;UBERON:0006238!4.38e-27!69;UBERON:0000956!3.27e-26!25;UBERON:0000203!3.27e-26!25;UBERON:0002020!9.15e-26!34;UBERON:0003528!9.15e-26!34;UBERON:0002619!5.68e-25!22;UBERON:0001950!1.51e-22!20;UBERON:0000200!4.73e-21!6;UBERON:0007023!1.95e-18!115;UBERON:0004121!1.85e-17!169;UBERON:0000924!6.31e-17!173;UBERON:0006601!6.31e-17!173;UBERON:0000033!1.66e-16!123;UBERON:0002771!3.00e-16!3;UBERON:0000153!1.61e-15!129;UBERON:0007811!1.61e-15!129;UBERON:0001871!1.09e-10!7;UBERON:0002106!2.24e-08!3;UBERON:0004854!2.24e-08!3;UBERON:0009034!2.24e-08!3;UBERON:0002095!2.24e-08!3;UBERON:0004782!2.24e-08!3;UBERON:0003281!2.24e-08!3;UBERON:0009664!2.24e-08!3;UBERON:0002296!2.24e-08!3;UBERON:0005602!2.24e-08!3;UBERON:0001179!2.24e-08!3;UBERON:0006293!2.24e-08!3;UBERON:0002240!3.68e-08!3;UBERON:0000025!6.18e-08!194;UBERON:0002902!9.67e-07!1;UBERON:0009899!9.67e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.27e-23;3!UBERON:0002021;1.60e-14;5!UBERON:0004177;1.60e-14;5!UBERON:0005057;1.60e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.27e-23,3;UBERON:0004854,3.27e-23,3;UBERON:0009034,3.27e-23,3;UBERON:0002095,3.27e-23,3;UBERON:0004782,3.27e-23,3;UBERON:0003281,3.27e-23,3;UBERON:0009664,3.27e-23,3;UBERON:0002296,3.27e-23,3;UBERON:0005602,3.27e-23,3;UBERON:0001179,3.27e-23,3;UBERON:0006293,3.27e-23,3;UBERON:0002021,1.40e-14,5;UBERON:0004177,8.99e-11,7;UBERON:0005057,8.99e-11,7;UBERON:0000945,1.35e-09,8;UBERON:0010039,1.35e-09,8;UBERON:0004457,7.92e-07,12;UBERON:0000042,7.92e-07,12;UBERON:0003887,7.92e-07,12 | |||
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|short_description=p8@GDPD2 | |||
}} | }} |
Latest revision as of 06:06, 16 September 2015
Short description: | p8@GDPD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GDPD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000374382, uc004dyh.2, uc010nkx.1, uc010nky.1, uc011mpk.1, uc011mpl.1, uc011mpm.1_5end |
EntrezGene: | GDPD2 |
HGNC: | 25974 |
UniProt: | Q9HCC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.83e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.27e-23 | 3 |
gastrointestinal system mesentery | 3.27e-23 | 3 |
stomach region | 3.27e-23 | 3 |
mesentery | 3.27e-23 | 3 |
gastrointestinal system serosa | 3.27e-23 | 3 |
mesentery of stomach | 3.27e-23 | 3 |
gut mesentery | 3.27e-23 | 3 |
dorsal mesentery | 3.27e-23 | 3 |
dorsal mesogastrium | 3.27e-23 | 3 |
peritoneal cavity | 3.27e-23 | 3 |
spleen primordium | 3.27e-23 | 3 |
occipital lobe | 1.40e-14 | 5 |
hemopoietic organ | 8.99e-11 | 7 |
immune organ | 8.99e-11 | 7 |
stomach | 1.35e-09 | 8 |
food storage organ | 1.35e-09 | 8 |
cavity lining | 7.92e-07 | 12 |
serous membrane | 7.92e-07 | 12 |
intraembryonic coelom | 7.92e-07 | 12 |