FFCP PHASE1:Hg19::chr1:114414288..114414310,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26191 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9652 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-2bp_to_ENST00000484147_5end | |||
|cluster_id=chr1:114414288..114414310,- | |||
|coexpression_cluster_id=C1462 | |||
|description=CAGE_peak_2_at_PTPN22_5end | |||
|id=chr1:114414288..114414310,- | |||
|ontology_enrichment_celltype=CL:0000037!1.13e-71!172;CL:0000566!1.13e-71!172;CL:0000738!9.52e-68!140;CL:0002032!4.70e-66!165;CL:0000837!4.70e-66!165;CL:0000988!8.57e-65!182;CL:0002031!5.50e-55!124;CL:0002087!5.26e-52!119;CL:0000763!2.93e-34!112;CL:0000049!2.93e-34!112;CL:0000542!6.51e-29!53;CL:0000051!6.51e-29!53;CL:0000838!1.09e-28!52;CL:0000766!4.71e-28!76;CL:0000557!9.68e-25!71;CL:0000839!2.43e-23!70;CL:0002009!1.13e-21!65;CL:0000084!2.86e-21!25;CL:0000827!2.86e-21!25;CL:0000134!2.89e-20!358;CL:0002194!5.25e-20!63;CL:0000576!5.25e-20!63;CL:0000040!5.25e-20!63;CL:0000559!5.25e-20!63;CL:0002320!6.06e-19!365;CL:0002057!9.42e-19!42;CL:0000791!6.10e-18!18;CL:0000789!6.10e-18!18;CL:0002420!6.10e-18!18;CL:0002419!6.10e-18!18;CL:0000790!6.10e-18!18;CL:0000860!1.35e-16!45;CL:0000219!9.15e-15!390;CL:0000048!2.13e-13!430;CL:0000034!3.31e-13!444;CL:0000723!6.78e-13!436;CL:0000625!6.01e-12!11;CL:0000945!1.53e-07!24;CL:0000826!1.53e-07!24;CL:0000451!1.61e-07!10;CL:0000990!8.59e-07!8;CL:0000624!8.87e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.78e-30;18!CL:0000789;4.78e-30;18!CL:0002419;4.78e-30;18!CL:0000084;4.06e-27;25!CL:0000625;1.08e-19;11!CL:0000860;2.42e-19;33!CL:0002057;2.42e-19;33!CL:0000473;8.30e-17;39!CL:0000234;8.30e-17;39!CL:0000766;3.43e-14;69!CL:0000542;7.59e-14;53!CL:0002087;1.20e-13;104!CL:0000738;2.27e-12;136!CL:0000576;4.09e-11;48!CL:0000624;1.56e-10;6!CL:0000988;2.55e-09;177!CL:0000097;1.49e-08;5!CL:0000763;4.40e-08;100!CL:0000094;3.35e-07;8!CL:0000623;7.67e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.09e-60,136;CL:0000037,4.23e-56,168;CL:0002032,1.75e-52,161;CL:0000837,1.75e-52,161;CL:0000988,5.86e-52,177;CL:0002031,8.74e-48,120;CL:0002087,2.92e-43,115;CL:0000791,3.80e-30,18;CL:0000789,3.80e-30,18;CL:0002420,3.80e-30,18;CL:0002419,3.80e-30,18;CL:0000790,3.80e-30,18;CL:0000084,2.43e-27,25;CL:0000827,2.43e-27,25;CL:0000763,4.54e-27,108;CL:0000049,4.54e-27,108;CL:0000766,1.37e-26,72;CL:0000838,2.96e-24,52;CL:0000542,1.32e-23,53;CL:0000051,1.32e-23,53;CL:0000557,4.88e-23,67;CL:0000473,9.00e-21,48;CL:0000234,9.00e-21,48;CL:0000839,3.70e-20,66;CL:0000860,1.12e-19,42;CL:0002057,1.12e-19,42;CL:0000625,1.15e-19,11;CL:0002009,2.65e-18,61;CL:0002194,4.70e-16,59;CL:0000576,4.70e-16,59;CL:0000040,4.70e-16,59;CL:0000559,4.70e-16,59;CL:0000134,7.65e-14,354;CL:0002320,3.88e-13,361;CL:0000219,1.09e-10,386;CL:0000624,1.15e-10,6;CL:0000097,9.95e-09,5;CL:0002028,9.95e-09,5;CL:0000048,3.31e-08,427;CL:0000034,3.56e-08,441;CL:0000723,8.30e-08,433;CL:0000094,2.23e-07,8;CL:0000623,7.64e-07,3;CL:0000825,7.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;4.78e-30;18!CL:0002057;7.43e-16;42!CL:0000051;7.59e-14;53!CL:0000049;7.15e-07;108 | |||
|ontology_enrichment_disease=DOID:2531!2.60e-11!51;DOID:0060083!2.60e-11!51;DOID:1240!1.23e-07!39;DOID:0060058!7.02e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.00e-33!102;UBERON:0003061!7.00e-33!102;UBERON:0002193!2.64e-28!112;UBERON:0002371!2.09e-22!80;UBERON:0001474!2.21e-19!86;UBERON:0002384!1.29e-17!375;UBERON:0002405!3.10e-16!115;UBERON:0004765!1.04e-14!101;UBERON:0001434!1.04e-14!101;UBERON:0003081!8.51e-09!216;UBERON:0002204!6.22e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.15e-11;15!UBERON:0000179;1.15e-11;15!UBERON:0000463;1.15e-11;15!UBERON:0002390;1.25e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.03e-34,98;UBERON:0003061,2.03e-34,98;UBERON:0002193,1.02e-29,108;UBERON:0002405,1.60e-20,93;UBERON:0002371,5.05e-19,76;UBERON:0001474,7.49e-17,82;UBERON:0004765,1.99e-14,90;UBERON:0002384,3.50e-12,371;UBERON:0001434,5.62e-12,100;UBERON:0000178,1.17e-11,15;UBERON:0000179,1.17e-11,15;UBERON:0000463,1.17e-11,15;UBERON:0003081,6.09e-10,203;UBERON:0004177,2.00e-08,7;UBERON:0005057,2.00e-08,7;UBERON:0002370,1.65e-07,4;UBERON:0005058,1.65e-07,4;UBERON:0009113,1.65e-07,4;UBERON:0003295,1.65e-07,4;UBERON:0005562,1.65e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21598876669059,0.903106483949403,1.41679406364623,1.96682138424452,13.8178583314997,0.77408061658038,0,0,0,2.78881922089086,2.55904618477359,0.880801318004542,1.10799081706375,3.40925560699241,3.03815219002193,0.671746422719773,1.29557466407592,0.515151135268373,1.45398238779565,1.13362783106643,0.727752183563449,2.32429036905685,2.05583944010913,1.23882548358041,1.1507695692886,1.2808035326455,1.18241114944293,2.41321976515633,1.29096936716765,2.70852973188684,1.69418105588344,2.18324920046277,2.47195832889593,3.67300670845083,3.20929027076094,1.91801137739712,0.989553900560148,1.39624560335142,0,1.16083695451434,0,0.622822248995575,1.00499466102697,2.08593167368081,0.434377689410233,1.21079900526674,1.84138817993782,1.89877432464531,0.211255286311942,0,0,0.898629049171961,0.450530678524519,1.6072558669708,0,0.19891667719909,0.182664153764634,0,0.546138611262131,0.889509253863555,0,0,1.72425731986345,0.661044872784862,0,1.70763890732835,0.587237189370939,0.382273228125229,1.32171328579026,5.04457706683382,0.263384084775077,4.91774425284583,4.71612915298998,2.46721798799411,3.67810289859492,3.91106719960308,1.89379122293893,0,12.1437398004839,6.48132996444642,6.86755073209225,8.6657236404805,6.02029202710673,7.54344215847294,4.43982342429925,4.69795030235942,11.302320343667,3.70716407905151,2.67540828089713,0,4.19244567980995,3.83220493601921,3.4362744548263,8.8556892206826,4.45991580053735,3.25541726928209,11.4054245333805,4.66782869141096,7.29523683580185,12.4930726552346,8.52398107358461,4.10563998460523,12.7012248231581,14.7092107680929,7.53086900190555,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.870648686496336,0.930705723632056,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06340959063441,0,0,0,0,0.100528972411631,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0.492434012174795,2.80805118167085,1.0404181360211,0,0,0.141775097242386,0,0,0,55.1782826443457,2.64145302039678,2.90259361757081,2.59415916150531,2.65109110195398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0.537182889719687,3.36255431980582,16.35355309676,10.9970063178354,9.75407075726088,0,0,0,0,0,1.49801404789436,5.9832291840805,5.38740167466846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13536052245775,3.23571301227925,4.05564719653088,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0,0,0,0.62962469366128,1.3940745403212,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0.6196469961995,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,5.07447609232169,3.82318603571188,3.98753031021914,1.42939065274673,2.46817363851717,3.24236655596359,2.70015718619057,2.37937552888281,0,0,0,0.185803175125719,0.144269212976445,1.84968792705877,0.637705090915289,1.59663497146253,2.48956981172077,2.96343015813436,0.324621940274555,1.40398589056729,0.456469358066384,2.0368386450493,0,0,0.1605880751037,0.201799707191048,1.27753871307098,1.37402137902306,0,0.223676107892416,0,0.586164286206121,1.39203086947621,0,0.270455678475983,0.33307196799782,0,0,0.293016358543788,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0.111308705022906,0.824019371133798,0,0.597743964753209,2.21027132424918,0,0,0.861593638227486,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0.638002319463839,0,0,4.08773192782946,0.470940769185074,0.831058409500782,0,0,0,0,0.158936578980379,0,0,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0,0,0,0.364909578431332,0,0,0.394584402849391,1.20990716048664,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0,0.411125773940253,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.508039992394707,0,0,0,0,0,28.3467103354891,10.0594254092533,0,0,0.236417121897595,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.747511887973863,0.314408610199332,1.24271716604159,0,0.197611631897944,0.243585196761792,0,0,0,0.306345576763462,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0.310874401165561,0.591420599958536,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| |||
|short_description=p2@PTPN22 | |||
}} |
Latest revision as of 06:16, 16 September 2015
Short description: | p2@PTPN22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTPN22_5end |
Coexpression cluster: | C1462_Mast_immature_CD4_Macrophage_Dendritic_CD8_CD19 |
Association with transcript: | -2bp_to_ENST00000484147_5end |
EntrezGene: | PTPN22 |
HGNC: | 9652 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.03e-34 | 98 |
blood island | 2.03e-34 | 98 |
hemolymphoid system | 1.02e-29 | 108 |
immune system | 1.60e-20 | 93 |
bone marrow | 5.05e-19 | 76 |
bone element | 7.49e-17 | 82 |
skeletal element | 1.99e-14 | 90 |
connective tissue | 3.50e-12 | 371 |
skeletal system | 5.62e-12 | 100 |
blood | 1.17e-11 | 15 |
haemolymphatic fluid | 1.17e-11 | 15 |
organism substance | 1.17e-11 | 15 |
lateral plate mesoderm | 6.09e-10 | 203 |
hemopoietic organ | 2.00e-08 | 7 |
immune organ | 2.00e-08 | 7 |
thymus | 1.65e-07 | 4 |
hemolymphoid system gland | 1.65e-07 | 4 |
thymic region | 1.65e-07 | 4 |
pharyngeal gland | 1.65e-07 | 4 |
thymus primordium | 1.65e-07 | 4 |