FFCP PHASE1:Hg19::chr1:114472222..114472316,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=204851 | |EntrezGene=204851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19006 | |HGNC=19006 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SQL3,Q86Z02 | |UniProt=Q5SQL3,Q86Z02 | ||
|association_with_transcript=-15bp_to_ENST00000369555,ENST00000369558_5end | |association_with_transcript=-15bp_to_ENST00000369555,ENST00000369558_5end | ||
|cluster_id=chr1:114472222..114472316,+ | |||
|description=CAGE_peak_1_at_HIPK1_5end | |description=CAGE_peak_1_at_HIPK1_5end | ||
|id=chr1:114472222..114472316,+ | |id=chr1:114472222..114472316,+ | ||
|ontology_enrichment_celltype=CL:0000037!3.07e-27!172;CL:0000566!3.07e-27!172;CL:0000738!3.49e-25!140;CL:0000763!5.05e-25!112;CL:0000049!5.05e-25!112;CL:0002032!1.33e-24!165;CL:0000837!1.33e-24!165;CL:0000988!7.93e-23!182;CL:0000766!1.44e-22!76;CL:0000557!1.38e-19!71;CL:0002031!1.01e-18!124;CL:0000839!1.12e-18!70;CL:0002009!9.94e-18!65;CL:0002057!2.36e-17!42;CL:0002087!1.09e-16!119;CL:0002194!1.45e-16!63;CL:0000576!1.45e-16!63;CL:0000040!1.45e-16!63;CL:0000559!1.45e-16!63;CL:0000860!2.19e-16!45;CL:0000791!6.21e-07!18;CL:0000789!6.21e-07!18;CL:0002420!6.21e-07!18;CL:0002419!6.21e-07!18;CL:0000790!6.21e-07!18;CL:0000094!8.79e-07!8 | |ontology_enrichment_celltype=CL:0000037!3.07e-27!172;CL:0000566!3.07e-27!172;CL:0000738!3.49e-25!140;CL:0000763!5.05e-25!112;CL:0000049!5.05e-25!112;CL:0002032!1.33e-24!165;CL:0000837!1.33e-24!165;CL:0000988!7.93e-23!182;CL:0000766!1.44e-22!76;CL:0000557!1.38e-19!71;CL:0002031!1.01e-18!124;CL:0000839!1.12e-18!70;CL:0002009!9.94e-18!65;CL:0002057!2.36e-17!42;CL:0002087!1.09e-16!119;CL:0002194!1.45e-16!63;CL:0000576!1.45e-16!63;CL:0000040!1.45e-16!63;CL:0000559!1.45e-16!63;CL:0000860!2.19e-16!45;CL:0000791!6.21e-07!18;CL:0000789!6.21e-07!18;CL:0002420!6.21e-07!18;CL:0002419!6.21e-07!18;CL:0000790!6.21e-07!18;CL:0000094!8.79e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.13e-15;33!CL:0002057;5.13e-15;33!CL:0000576;9.41e-12;48!CL:0000473;2.18e-11;39!CL:0000234;2.18e-11;39!CL:0000766;4.28e-10;69!CL:0000763;1.37e-07;100!CL:0000791;6.02e-07;18!CL:0000789;6.02e-07;18!CL:0002419;6.02e-07;18!CL:0000094;8.69e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.63e-27,168;CL:0000738,1.51e-25,136;CL:0000763,1.53e-25,108;CL:0000049,1.53e-25,108;CL:0002032,7.36e-25,161;CL:0000837,7.36e-25,161;CL:0000988,1.60e-23,177;CL:0000766,2.34e-23,72;CL:0000557,2.60e-20,67;CL:0000839,2.26e-19,66;CL:0002031,5.11e-19,120;CL:0002009,1.90e-18,61;CL:0000860,2.36e-17,42;CL:0002057,2.36e-17,42;CL:0002194,2.98e-17,59;CL:0000576,2.98e-17,59;CL:0000040,2.98e-17,59;CL:0000559,2.98e-17,59;CL:0002087,5.85e-17,115;CL:0000473,7.90e-16,48;CL:0000234,7.90e-16,48;CL:0000791,6.21e-07,18;CL:0000789,6.21e-07,18;CL:0002420,6.21e-07,18;CL:0002419,6.21e-07,18;CL:0000790,6.21e-07,18;CL:0000094,8.79e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;6.54e-13;42!CL:0000049;1.32e-07;108!CL:0000790;6.02e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.31e-33!115;UBERON:0002390!4.89e-22!102;UBERON:0003061!4.89e-22!102;UBERON:0002193!2.05e-18!112;UBERON:0001474!1.06e-15!86;UBERON:0002371!2.51e-15!80;UBERON:0001049!3.52e-11!57;UBERON:0005068!3.52e-11!57;UBERON:0006241!3.52e-11!57;UBERON:0007135!3.52e-11!57;UBERON:0002405!4.33e-11!115;UBERON:0004765!1.20e-10!101;UBERON:0001434!1.20e-10!101;UBERON:0002780!3.26e-09!41;UBERON:0001890!3.26e-09!41;UBERON:0006240!3.26e-09!41;UBERON:0003080!3.81e-09!42;UBERON:0000955!6.40e-09!69;UBERON:0006238!6.40e-09!69;UBERON:0002616!1.35e-08!59;UBERON:0001017!1.58e-07!82;UBERON:0001893!2.79e-07!34;UBERON:0002020!2.87e-07!34;UBERON:0003528!2.87e-07!34;UBERON:0002791!5.05e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.33e-09;114!UBERON:0002780;4.89e-07;41!UBERON:0001890;4.89e-07;41!UBERON:0000073;8.04e-07;53!UBERON:0002616;8.04e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.50e-33,114;UBERON:0002390,1.53e-22,98;UBERON:0003061,1.53e-22,98;UBERON:0002193,9.28e-19,108;UBERON:0001474,4.09e-16,82;UBERON:0002371,8.99e-16,76;UBERON:0002405,5.99e-14,93;UBERON:0004765,2.44e-11,90;UBERON:0001049,3.10e-11,56;UBERON:0005068,3.10e-11,56;UBERON:0006241,3.10e-11,56;UBERON:0007135,3.10e-11,56;UBERON:0000073,1.15e-10,53;UBERON:0002616,1.15e-10,53;UBERON:0001434,1.43e-09,100;UBERON:0002780,3.26e-09,41;UBERON:0001890,3.26e-09,41;UBERON:0003080,3.26e-09,41;UBERON:0006240,3.26e-09,41;UBERON:0000955,6.16e-09,68;UBERON:0006238,6.16e-09,68;UBERON:0001016,1.45e-07,89;UBERON:0001017,1.59e-07,81;UBERON:0001893,2.79e-07,34;UBERON:0003528,2.87e-07,34;UBERON:0002020,2.87e-07,34 | |||
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| ||
|short_description=p1@HIPK1 | |short_description=p1@HIPK1 | ||
}} | }} |
Latest revision as of 06:28, 16 September 2015
Short description: | p1@HIPK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HIPK1_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000369555, ENST00000369558_5end |
EntrezGene: | HIPK1 |
HGNC: | 19006 |
UniProt: | Q5SQL3Q86Z02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.63e-27 | 168 |
leukocyte | 1.51e-25 | 136 |
myeloid cell | 1.53e-25 | 108 |
common myeloid progenitor | 1.53e-25 | 108 |
hematopoietic oligopotent progenitor cell | 7.36e-25 | 161 |
hematopoietic multipotent progenitor cell | 7.36e-25 | 161 |
hematopoietic cell | 1.60e-23 | 177 |
myeloid leukocyte | 2.34e-23 | 72 |
granulocyte monocyte progenitor cell | 2.60e-20 | 67 |
myeloid lineage restricted progenitor cell | 2.26e-19 | 66 |
hematopoietic lineage restricted progenitor cell | 5.11e-19 | 120 |
macrophage dendritic cell progenitor | 1.90e-18 | 61 |
classical monocyte | 2.36e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.36e-17 | 42 |
monopoietic cell | 2.98e-17 | 59 |
monocyte | 2.98e-17 | 59 |
monoblast | 2.98e-17 | 59 |
promonocyte | 2.98e-17 | 59 |
nongranular leukocyte | 5.85e-17 | 115 |
defensive cell | 7.90e-16 | 48 |
phagocyte | 7.90e-16 | 48 |
mature alpha-beta T cell | 6.21e-07 | 18 |
alpha-beta T cell | 6.21e-07 | 18 |
immature T cell | 6.21e-07 | 18 |
mature T cell | 6.21e-07 | 18 |
immature alpha-beta T cell | 6.21e-07 | 18 |
granulocyte | 8.79e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.50e-33 | 114 |
hematopoietic system | 1.53e-22 | 98 |
blood island | 1.53e-22 | 98 |
hemolymphoid system | 9.28e-19 | 108 |
bone element | 4.09e-16 | 82 |
bone marrow | 8.99e-16 | 76 |
immune system | 5.99e-14 | 93 |
skeletal element | 2.44e-11 | 90 |
neural tube | 3.10e-11 | 56 |
neural rod | 3.10e-11 | 56 |
future spinal cord | 3.10e-11 | 56 |
neural keel | 3.10e-11 | 56 |
regional part of nervous system | 1.15e-10 | 53 |
regional part of brain | 1.15e-10 | 53 |
skeletal system | 1.43e-09 | 100 |
regional part of forebrain | 3.26e-09 | 41 |
forebrain | 3.26e-09 | 41 |
anterior neural tube | 3.26e-09 | 41 |
future forebrain | 3.26e-09 | 41 |
brain | 6.16e-09 | 68 |
future brain | 6.16e-09 | 68 |
nervous system | 1.45e-07 | 89 |
central nervous system | 1.59e-07 | 81 |
telencephalon | 2.79e-07 | 34 |
brain grey matter | 2.87e-07 | 34 |
gray matter | 2.87e-07 | 34 |