FFCP PHASE1:Hg19::chrX:70288162..70288233,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29934 | |EntrezGene=29934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14976 | |HGNC=14976 | ||
|TSSclassifier=strong | |||
|UniProt=Q3SYF1,Q9UMY4 | |UniProt=Q3SYF1,Q9UMY4 | ||
|association_with_transcript=0bp_to_ENST00000490561,NM_013346,uc004dyp.1,uc004dyr.1_5end | |association_with_transcript=0bp_to_ENST00000490561,NM_013346,uc004dyp.1,uc004dyr.1_5end | ||
|cluster_id=chrX:70288162..70288233,- | |||
|description=CAGE_peak_1_at_SNX12_5end | |description=CAGE_peak_1_at_SNX12_5end | ||
|id=chrX:70288162..70288233,- | |id=chrX:70288162..70288233,- | ||
|ontology_enrichment_celltype=CL:0002321!2.40e-22!248;CL:0000220!1.73e-21!246;CL:0000222!1.23e-14!119;CL:0000066!2.34e-12!254;CL:0000055!4.25e-10!180;CL:0000183!1.62e-09!59;CL:0000115!6.62e-09!35;CL:0002078!1.26e-08!44;CL:0000213!4.67e-08!57;CL:0000215!4.67e-08!57;CL:0000192!8.41e-08!42;CL:0000514!8.41e-08!42;CL:0000710!9.61e-08!20;CL:0000393!1.10e-07!60;CL:0000211!1.10e-07!60;CL:0000680!1.14e-07!57;CL:0000056!1.14e-07!57;CL:0000355!1.14e-07!57;CL:0000187!1.43e-07!54;CL:0002077!4.10e-07!33;CL:0000359!5.90e-07!32;CL:0002139!6.85e-07!24 | |ontology_enrichment_celltype=CL:0002321!2.40e-22!248;CL:0000220!1.73e-21!246;CL:0000222!1.23e-14!119;CL:0000066!2.34e-12!254;CL:0000055!4.25e-10!180;CL:0000183!1.62e-09!59;CL:0000115!6.62e-09!35;CL:0002078!1.26e-08!44;CL:0000213!4.67e-08!57;CL:0000215!4.67e-08!57;CL:0000192!8.41e-08!42;CL:0000514!8.41e-08!42;CL:0000710!9.61e-08!20;CL:0000393!1.10e-07!60;CL:0000211!1.10e-07!60;CL:0000680!1.14e-07!57;CL:0000056!1.14e-07!57;CL:0000355!1.14e-07!57;CL:0000187!1.43e-07!54;CL:0002077!4.10e-07!33;CL:0000359!5.90e-07!32;CL:0002139!6.85e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000115;4.81e-08;36!CL:0000710;7.28e-08;20!CL:0002077;5.74e-07;34!CL:0002139;6.10e-07;24!CL:0000359;9.53e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.51e-23,250;CL:0000222,2.54e-15,121;CL:0000066,3.89e-12,253;CL:0000115,2.26e-09,36;CL:0002078,4.64e-09,45;CL:0000213,1.88e-08,58;CL:0000215,1.88e-08,58;CL:0000192,4.57e-08,43;CL:0000514,4.57e-08,43;CL:0000393,6.22e-08,61;CL:0000211,6.22e-08,61;CL:0000680,6.41e-08,58;CL:0000056,6.41e-08,58;CL:0000355,6.41e-08,58;CL:0000187,8.04e-08,55;CL:0000710,9.61e-08,20;CL:0002077,1.32e-07,34;CL:0000359,5.90e-07,32;CL:0002139,6.85e-07,24;CL:0000221,9.23e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!5.02e-21!659;UBERON:0000922!6.98e-19!612;UBERON:0000483!1.59e-17!309;UBERON:0000119!2.09e-17!312;UBERON:0000477!2.11e-16!286;UBERON:0002050!2.33e-16!605;UBERON:0005423!2.33e-16!605;UBERON:0000481!3.05e-16!347;UBERON:0000923!5.32e-16!604;UBERON:0005291!5.32e-16!604;UBERON:0006598!5.32e-16!604;UBERON:0002532!5.32e-16!604;UBERON:0000475!8.87e-15!365;UBERON:0000467!1.29e-14!625;UBERON:0004111!1.41e-14!241;UBERON:0000480!2.54e-14!626;UBERON:0002049!3.66e-13!79;UBERON:0007798!3.66e-13!79;UBERON:0000025!1.06e-12!194;UBERON:0004872!5.83e-12!84;UBERON:0000064!2.61e-11!219;UBERON:0000055!3.46e-11!69;UBERON:0001981!8.67e-10!60;UBERON:0007500!8.67e-10!60;UBERON:0004537!8.67e-10!60;UBERON:0006965!8.67e-10!60;UBERON:0002100!1.30e-09!216;UBERON:0003914!1.42e-09!118;UBERON:0001637!4.74e-09!42;UBERON:0003509!4.74e-09!42;UBERON:0004572!4.74e-09!42;UBERON:0005256!1.86e-08!143;UBERON:0000924!2.26e-08!173;UBERON:0006601!2.26e-08!173;UBERON:0004121!2.33e-08!169;UBERON:0000490!4.84e-08!138;UBERON:0000914!8.25e-08!83;UBERON:0002329!8.25e-08!83;UBERON:0003077!8.25e-08!83;UBERON:0003059!8.25e-08!83;UBERON:0007282!8.25e-08!83;UBERON:0009618!8.25e-08!83;UBERON:0007285!8.25e-08!83;UBERON:0004535!9.42e-08!110;UBERON:0001009!1.71e-07!113;UBERON:0002385!2.04e-07!63;UBERON:0001015!2.04e-07!63;UBERON:0000383!2.04e-07!63;UBERON:0004290!3.06e-07!70;UBERON:0001134!3.25e-07!61;UBERON:0002036!3.25e-07!61;UBERON:0003082!3.25e-07!61;UBERON:0000062!3.33e-07!511;UBERON:0000486!3.35e-07!82;UBERON:0003075!5.42e-07!86;UBERON:0007284!5.42e-07!86;UBERON:0003104!6.00e-07!238;UBERON:0009142!6.00e-07!238;UBERON:0002346!6.20e-07!90;UBERON:0000033!6.86e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.71e-07;42!UBERON:0003509;7.71e-07;42!UBERON:0004572;7.71e-07;42 | |||
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|short_description=p1@SNX12 | |short_description=p1@SNX12 | ||
}} | }} |
Latest revision as of 06:32, 16 September 2015
Short description: | p1@SNX12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNX12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000490561, NM_013346, uc004dyp.1, uc004dyr.1_5end |
EntrezGene: | SNX12 |
HGNC: | 14976 |
UniProt: | Q3SYF1Q9UMY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.51e-23 | 250 |
mesodermal cell | 2.54e-15 | 121 |
epithelial cell | 3.89e-12 | 253 |
endothelial cell | 2.26e-09 | 36 |
meso-epithelial cell | 4.64e-09 | 45 |
lining cell | 1.88e-08 | 58 |
barrier cell | 1.88e-08 | 58 |
smooth muscle cell | 4.57e-08 | 43 |
smooth muscle myoblast | 4.57e-08 | 43 |
electrically responsive cell | 6.22e-08 | 61 |
electrically active cell | 6.22e-08 | 61 |
muscle precursor cell | 6.41e-08 | 58 |
myoblast | 6.41e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.41e-08 | 58 |
muscle cell | 8.04e-08 | 55 |
neurecto-epithelial cell | 9.61e-08 | 20 |
ecto-epithelial cell | 1.32e-07 | 34 |
vascular associated smooth muscle cell | 5.90e-07 | 32 |
endothelial cell of vascular tree | 6.85e-07 | 24 |
ectodermal cell | 9.23e-07 | 72 |