FFCP PHASE1:Hg19::chrX:70288369..70288404,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:70288369..70288404,- to FFCP PHASE1:Hg19::chrX:70288369..70288404,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29934 | |EntrezGene=29934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14976 | |HGNC=14976 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-96bp_to_ENST00000374274_5end | |||
|cluster_id=chrX:70288369..70288404,- | |||
|coexpression_cluster_id=C130 | |||
|description=CAGE_peak_3_at_SNX12_5end | |||
|id=chrX:70288369..70288404,- | |||
|ontology_enrichment_celltype=CL:0000860!1.24e-07!45;CL:0002057!5.32e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.94e-07;6!CL:0000404;2.94e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.65e-11,8;CL:0000540,2.95e-07,6;CL:0000031,2.95e-07,6;CL:0000404,2.95e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;2.94e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0.218441372130172,0.527533956456907,0,0,0,0,0.730310090387373,0,0.61560529038394,0.204000691244253,0,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0.314843125254717,0.393364276848904,0.383829398097213,0,0,0,0.739508020333575,0.154934401160603,0,0.293600439334847,0,0.200544447470142,0.434021741431704,0.223915474239924,0.32389366601898,0,0.290796477559129,0,1.21292030593908,0.232429036905685,0,0.309706370895104,0.575384784644301,0.512321413058201,0.236482229888585,1.03423704220986,0.645484683583826,0,0.376484679085209,1.09162460023138,0.224723484445085,0.306083892370903,0,0.639337125799041,0.329851300186716,0.199463657621632,1.27867425159808,0,0.56738522469114,0.622822248995575,0.75374599577023,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0.209658645508376,0.22465726229299,0.150176892841506,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0,0.167186495390678,0.651844533267181,0.946895611469467,0,0.111410456885174,0,0,0.270803863765016,0.25618263945135,0.260118695119756,0,0,0.289803085735052,0,0.267540828089713,0,0,0,0,0,0,0.651083453856419,0,0,0.511946444617674,1.24930726552346,0.236777252044017,0,0,0,0.144824403882799,0,0,0.255725123687061,0.361439152384566,1.00267582127178,0,0,0,0.0945348171640679,0,0,0.130979075497713,0.364295288292542,0,0,0.348259474598534,0,0.238490624305342,0,0.371457501329565,0.39752481473341,0.860234595106124,0.694281003215189,0.56530794192401,0,0.275118041940067,0.417989933073621,0.258416759169329,0,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0.949265659568129,0.366403487860815,1.31780417436063,0,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.469737994575059,0.161872944368132,0.140450806702248,0,0.245668634623536,0,0,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0,0,0.226864366320042,0,0,0.211931901159562,0.300091096084402,0,0,0.18611685633159,0,0.292311015483596,0,0.276149695926898,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0.487894824518382,0.265059536642971,0.348581828608555,0,0.504641701751257,0,0,0,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0.723033089650446,0.330881918197182,0.435758888184812,0,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0.462985512576611,0,0,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0.616339038092582,0.207328115540772,0,0.50496973370552,0,0,0,0,0,0.300343057843917,0.285826432630578,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.532844358032199,0,0.542621605391443,0,0,0.355391948742546,0,0,0.871533458600294,0.299918973546171,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0.385029108839245,0,1.30139853857622,0,0,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0.606255142892519,1.66435439510497,0.604780586659361,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0.229628896329213,0,0.393373244878272,0,0.15403067420883,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,1.54227252690289,0.812839312631559,0.501689773854853,0.254876273045038,0,0.223874754722178,0,1.3071772551245,0,0,0,0.103041011647722,0.183138929636687,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0.214840489736547,0.145016693914229,0.340906509664404,0.0890320356467374,0.165284915360978,0,0,0,0.464845549297286,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0.404364963146632,0,0.421258456238981,0.975267478179181,0,0,0.272999822815972,0,0,0,0,0.438450885253763,0,0,0.405820753925408,0.92947049429925,0,0,0.196498082026242,0,0,0.211107635297664,0.329294892959902,1.13841952129715,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,1.13929437434833,0.238231775457789,0,0,0,0.79312517629427,0.213648142254946,0,0.245040215981032,0.185803175125719,0.28853842595289,0,0,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0.338583555603207,0,0.403599414382095,0.425846237690326,0,0.307240764308458,0,0,0,0.556812347790485,0,0.270455678475983,0.66614393599564,0,0,0.146508179271894,0.728163130497081,0.111443384277478,0,0.47748896947538,0.890894042497916,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0,0,0.276283915531148,0.251932747854276,0.20453736500431,0,0.311039587661807,0.269605053441981,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0.260427761085233,0,0.724999575434793,0.1137934482855,0,0,0.344743373241465,0,0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| ||
|short_description=p3@SNX12 | |||
}} | }} |
Latest revision as of 06:34, 16 September 2015
Short description: | p3@SNX12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SNX12_5end |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | -96bp_to_ENST00000374274_5end |
EntrezGene: | SNX12 |
HGNC: | 14976 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.65e-11 | 8 |
neuron | 2.95e-07 | 6 |
neuroblast | 2.95e-07 | 6 |
electrically signaling cell | 2.95e-07 | 6 |