FFCP PHASE1:Hg19::chr1:22987297..22987325,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=713 | |EntrezGene=713 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1242 | |HGNC=1242 | ||
|TSSclassifier=strong | |||
|UniProt=P02746 | |UniProt=P02746 | ||
|association_with_transcript=-467bp_to_M36278_5end | |association_with_transcript=-467bp_to_M36278_5end | ||
|cluster_id=chr1:22987297..22987325,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_9_at_C1QB_5end | |description=CAGE_peak_9_at_C1QB_5end | ||
|id=chr1:22987297..22987325,+ | |id=chr1:22987297..22987325,+ | ||
|ontology_enrichment_celltype=CL:0002619!1.61e-08!3 | |ontology_enrichment_celltype=CL:0002619!1.61e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002619;5.08e-29;3!CL:0000235;1.09e-24;6!CL:0000840;4.71e-14;5!CL:0000990;1.49e-09;8!CL:0000451;6.62e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,5.09e-29,3;CL:0000235,1.44e-24,6;CL:0000840,5.16e-14,5;CL:0001029,5.16e-14,5;CL:0002194,9.29e-14,59;CL:0000576,9.29e-14,59;CL:0000040,9.29e-14,59;CL:0000559,9.29e-14,59;CL:0002009,2.88e-13,61;CL:0000839,3.65e-12,66;CL:0000557,5.80e-12,67;CL:0000766,4.85e-11,72;CL:0000990,1.59e-09,8;CL:0000451,6.95e-08,10;CL:0000763,6.80e-07,108;CL:0000049,6.80e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0010115;3.15e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.12e-61!115;UBERON:0001049!6.71e-28!57;UBERON:0005068!6.71e-28!57;UBERON:0006241!6.71e-28!57;UBERON:0007135!6.71e-28!57;UBERON:0002616!1.10e-22!59;UBERON:0001017!1.07e-20!82;UBERON:0005743!1.33e-20!86;UBERON:0002780!6.78e-20!41;UBERON:0001890!6.78e-20!41;UBERON:0006240!6.78e-20!41;UBERON:0003075!1.52e-19!86;UBERON:0007284!1.52e-19!86;UBERON:0000955!2.17e-19!69;UBERON:0006238!2.17e-19!69;UBERON:0003080!2.78e-19!42;UBERON:0002020!1.58e-18!34;UBERON:0003528!1.58e-18!34;UBERON:0002346!2.92e-18!90;UBERON:0000073!9.05e-18!94;UBERON:0001016!9.05e-18!94;UBERON:0002791!4.25e-17!33;UBERON:0001893!1.84e-16!34;UBERON:0002619!1.75e-14!22;UBERON:0001869!4.98e-14!32;UBERON:0001950!6.74e-14!20;UBERON:0000062!5.45e-13!511;UBERON:0003056!1.25e-12!61;UBERON:0000956!2.08e-12!25;UBERON:0000203!2.08e-12!25;UBERON:0001871!2.42e-12!7;UBERON:0002298!1.09e-11!8;UBERON:0000153!2.97e-11!129;UBERON:0007811!2.97e-11!129;UBERON:0000033!1.33e-10!123;UBERON:0000025!4.58e-10!194;UBERON:0003076!7.43e-10!15;UBERON:0003057!7.43e-10!15;UBERON:0000467!6.06e-09!625;UBERON:0000480!6.79e-09!626;UBERON:0002420!2.91e-08!9;UBERON:0007245!2.91e-08!9;UBERON:0010009!2.91e-08!9;UBERON:0010011!2.91e-08!9;UBERON:0000454!2.91e-08!9;UBERON:0000477!4.00e-08!286;UBERON:0000468!6.04e-08!659;UBERON:0004121!6.60e-08!169;UBERON:0002308!7.88e-08!9;UBERON:0000125!7.88e-08!9;UBERON:0000923!1.21e-07!604;UBERON:0005291!1.21e-07!604;UBERON:0006598!1.21e-07!604;UBERON:0002532!1.21e-07!604;UBERON:0004111!1.32e-07!241;UBERON:0002050!1.35e-07!605;UBERON:0005423!1.35e-07!605;UBERON:0004733!1.56e-07!12;UBERON:0002028!1.56e-07!12;UBERON:0007277!1.56e-07!12;UBERON:0000924!1.59e-07!173;UBERON:0006601!1.59e-07!173;UBERON:0000922!2.84e-07!612;UBERON:0000349!3.52e-07!5;UBERON:0001896!4.59e-07!3;UBERON:0005290!4.59e-07!3;UBERON:0010096!4.59e-07!3;UBERON:0004732!7.17e-07!13;UBERON:0002771!8.61e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.29e-13;3!UBERON:0000029;9.38e-11;1!UBERON:0002171;1.57e-10;1!UBERON:0006518;1.57e-10;1!UBERON:0008949;1.57e-10;1!UBERON:0000101;1.57e-10;1!UBERON:0002167;1.57e-10;1!UBERON:0002363;3.15e-10;1!UBERON:0004177;3.27e-08;5!UBERON:0005057;3.27e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.51e-14,93;UBERON:0002106,3.79e-13,3;UBERON:0004854,3.79e-13,3;UBERON:0009034,3.79e-13,3;UBERON:0002095,3.79e-13,3;UBERON:0004782,3.79e-13,3;UBERON:0003281,3.79e-13,3;UBERON:0009664,3.79e-13,3;UBERON:0002296,3.79e-13,3;UBERON:0005602,3.79e-13,3;UBERON:0001179,3.79e-13,3;UBERON:0006293,3.79e-13,3;UBERON:0002193,4.65e-12,108;UBERON:0002390,2.36e-11,98;UBERON:0003061,2.36e-11,98;UBERON:0000029,8.95e-11,1;UBERON:0002171,1.30e-10,1;UBERON:0006518,1.30e-10,1;UBERON:0008949,1.30e-10,1;UBERON:0000101,1.30e-10,1;UBERON:0002167,1.30e-10,1;UBERON:0002363,2.08e-10,1;UBERON:0007645,2.08e-10,1;UBERON:0007647,2.08e-10,1;UBERON:0010115,2.08e-10,1;UBERON:0002371,2.18e-10,76;UBERON:0001474,1.58e-09,82;UBERON:0004765,1.48e-08,90;UBERON:0001434,1.47e-07,100 | |||
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| ||
|short_description=p9@C1QB | |short_description=p9@C1QB | ||
}} | }} |
Latest revision as of 06:35, 16 September 2015
Short description: | p9@C1QB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_C1QB_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | -467bp_to_M36278_5end |
EntrezGene: | C1QB |
HGNC: | 1242 |
UniProt: | P02746 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 5.09e-29 | 3 |
macrophage | 1.44e-24 | 6 |
immature conventional dendritic cell | 5.16e-14 | 5 |
common dendritic progenitor | 5.16e-14 | 5 |
monopoietic cell | 9.29e-14 | 59 |
monocyte | 9.29e-14 | 59 |
monoblast | 9.29e-14 | 59 |
promonocyte | 9.29e-14 | 59 |
macrophage dendritic cell progenitor | 2.88e-13 | 61 |
myeloid lineage restricted progenitor cell | 3.65e-12 | 66 |
granulocyte monocyte progenitor cell | 5.80e-12 | 67 |
myeloid leukocyte | 4.85e-11 | 72 |
conventional dendritic cell | 1.59e-09 | 8 |
dendritic cell | 6.95e-08 | 10 |
myeloid cell | 6.80e-07 | 108 |
common myeloid progenitor | 6.80e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
immune system | 2.51e-14 | 93 |
spleen | 3.79e-13 | 3 |
gastrointestinal system mesentery | 3.79e-13 | 3 |
stomach region | 3.79e-13 | 3 |
mesentery | 3.79e-13 | 3 |
gastrointestinal system serosa | 3.79e-13 | 3 |
mesentery of stomach | 3.79e-13 | 3 |
gut mesentery | 3.79e-13 | 3 |
dorsal mesentery | 3.79e-13 | 3 |
dorsal mesogastrium | 3.79e-13 | 3 |
peritoneal cavity | 3.79e-13 | 3 |
spleen primordium | 3.79e-13 | 3 |
hemolymphoid system | 4.65e-12 | 108 |
hematopoietic system | 2.36e-11 | 98 |
blood island | 2.36e-11 | 98 |
lymph node | 8.95e-11 | 1 |
lower lobe of right lung | 1.30e-10 | 1 |
right lung lobe | 1.30e-10 | 1 |
lower lobe of lung | 1.30e-10 | 1 |
lobe of lung | 1.30e-10 | 1 |
right lung | 1.30e-10 | 1 |
dura mater | 2.08e-10 | 1 |
future meninx | 2.08e-10 | 1 |
ectomeninx | 2.08e-10 | 1 |
future dura mater | 2.08e-10 | 1 |
bone marrow | 2.18e-10 | 76 |
bone element | 1.58e-09 | 82 |
skeletal element | 1.48e-08 | 90 |
skeletal system | 1.47e-07 | 100 |