FFCP PHASE1:Hg19::chr12:109747023..109747033,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=121643 | |EntrezGene=121643 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21399 | |HGNC=21399 | ||
|TSSclassifier=strong | |||
|UniProt=Q96NZ1,A6H901 | |UniProt=Q96NZ1,A6H901 | ||
|association_with_transcript=0bp_to_ENST00000266856,ENST00000299162,ENST00000355216,NM_213596,uc001toe.3,uc001tof.3_5end | |association_with_transcript=0bp_to_ENST00000266856,ENST00000299162,ENST00000355216,NM_213596,uc001toe.3,uc001tof.3_5end | ||
|cluster_id=chr12:109747023..109747033,- | |||
|coexpression_cluster_id=C3235 | |||
|description=CAGE_peak_3_at_FOXN4_5end | |description=CAGE_peak_3_at_FOXN4_5end | ||
|id=chr12:109747023..109747033,- | |id=chr12:109747023..109747033,- | ||
|ontology_enrichment_celltype=CL:0000242!2.72e-11!2;CL:0002319!5.37e-08!25;CL:0000540!9.24e-08!6;CL:0000031!9.24e-08!6;CL:0000404!9.24e-08!6 | |ontology_enrichment_celltype=CL:0000242!2.72e-11!2;CL:0002319!5.37e-08!25;CL:0000540!9.24e-08!6;CL:0000031!9.24e-08!6;CL:0000404!9.24e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000785;7.62e-26;1!CL:0000819;7.62e-26;1!CL:0000123;1.21e-13;2!CL:0000242;1.21e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,4.61e-26,1;CL:0000785,9.40e-14,2;CL:0000955,9.40e-14,2;CL:0000818,9.40e-14,2;CL:0000954,9.40e-14,2;CL:0000816,9.40e-14,2;CL:0000242,1.21e-13,2;CL:0000817,1.30e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000954;1.21e-13;2 | |||
|ontology_enrichment_disease=DOID:3119!9.35e-09!14 | |ontology_enrichment_disease=DOID:3119!9.35e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:0060073;7.62e-26;1!DOID:8675;7.62e-26;1!DOID:154;1.21e-13;2!DOID:4236;1.21e-13;2!DOID:3119;4.34e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,4.61e-26,1;DOID:8675,4.61e-26,1;DOID:154,1.37e-13,2;DOID:4236,1.37e-13,2;DOID:3119,4.19e-08,14 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002114;1.19e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,1.19e-09,2 | |||
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|short_description=p3@FOXN4 | |short_description=p3@FOXN4 | ||
}} | }} |
Latest revision as of 06:36, 16 September 2015
Short description: | p3@FOXN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FOXN4_5end |
Coexpression cluster: | C3235_gastrointestinal_neuroblastoma_merkel_carcinosarcoma_non_carcinoid_colon |
Association with transcript: | 0bp_to_ENST00000266856, ENST00000299162, ENST00000355216, NM_213596, uc001toe.3, uc001tof.3_5end |
EntrezGene: | FOXN4 |
HGNC: | 21399 |
UniProt: | Q96NZ1A6H901 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 4.61e-26 | 1 |
mature B cell | 9.40e-14 | 2 |
pre-B-II cell | 9.40e-14 | 2 |
transitional stage B cell | 9.40e-14 | 2 |
small pre-B-II cell | 9.40e-14 | 2 |
immature B cell | 9.40e-14 | 2 |
Merkel cell | 1.21e-13 | 2 |
precursor B cell | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
duodenum | 1.19e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 4.61e-26 | 1 |
lymphosarcoma | 4.61e-26 | 1 |
mixed cell type cancer | 1.37e-13 | 2 |
carcinosarcoma | 1.37e-13 | 2 |
gastrointestinal system cancer | 4.19e-08 | 14 |