FFCP PHASE1:Hg19::chr12:11002063..11002081,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11272 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18020 | |||
|TSSclassifier=strong | |||
|UniProt=Q16378,E7ESM0,F5H178,F5H0D7 | |||
|association_with_transcript=0bp_to_ENST00000228811,ENST00000431566,ENST00000540107,ENST00000542658,ENST00000544994,NM_001098538,NM_007244,uc001qyz.3,uc001qza.3,uc009zhq.1_5end | |||
|cluster_id=chr12:11002063..11002081,- | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_1_at_PRR4_5end | |||
|id=chr12:11002063..11002081,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;2.71e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.81e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.70e-19!115;UBERON:0003408!6.22e-08!10;UBERON:0002530!9.25e-08!59;UBERON:0001044!4.96e-07!6;UBERON:0003293!4.96e-07!6;UBERON:0003294!4.96e-07!6;UBERON:0010047!4.96e-07!6;UBERON:0000167!4.96e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.83e-10;6!UBERON:0003293;1.83e-10;6!UBERON:0003294;1.83e-10;6!UBERON:0010047;1.83e-10;6!UBERON:0003408;1.83e-10;6!UBERON:0000167;1.83e-10;6!UBERON:0004921;1.52e-09;33!UBERON:0003127;3.79e-09;2!UBERON:0001041;4.23e-09;14!UBERON:0001829;5.16e-09;2!UBERON:0000341;6.50e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.70e-10,6;UBERON:0003293,1.70e-10,6;UBERON:0003294,1.70e-10,6;UBERON:0010047,1.70e-10,6;UBERON:0000167,1.70e-10,6;UBERON:0004921,1.23e-09,118;UBERON:0007023,2.52e-09,114;UBERON:0003127,3.79e-09,2;UBERON:0001829,5.16e-09,2;UBERON:0000341,6.50e-09,2;UBERON:0001007,1.26e-08,145;UBERON:0001555,1.26e-08,145;UBERON:0007026,1.26e-08,145;UBERON:0000166,1.16e-07,22;UBERON:0001041,2.41e-07,87;UBERON:0004119,2.55e-07,160;UBERON:0000925,2.55e-07,160;UBERON:0006595,2.55e-07,160;UBERON:0000161,6.20e-07,36;UBERON:0001004,6.68e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,3.07392847834921,0,0,0,0,0,0,0,2.14258724659632,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,954.109616150189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0,0,0,167.653216637072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75734931830985,0,0,1.8876383142423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95543124919399,0.290633938513962,2.30029607499127,0,0,0.414656231081544,1.00883967391873,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,6.82222512167955,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.7738304960208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.1408409394525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,16533.5980650738,5.24939439509181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6154047601174,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0,0,0,0,0,29.0377718516793,0,0.252746318513952,0,0,0,0.661983911750998,0,0,0,3.46686682532847,0,0,0,0.698906672968121,0,0,0,0,86.708180740647,0,7532.84201317827,1.09633539717401,0,0.50648636764703,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.5171821287397,4.29226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1566.25098013038,91.3357012629059,474.717957427886,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.745156835296601,0,0,0.909894705249887,2.56918800190471,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.126831620387814,0,2758.83308282534,250.090433908204,0,0,0,0,0.606965604236632,0.455324382702595,0,0,0.342976018874837,0,0.0657727735628491,0,5.33910729081932,14.5212221773451,0,0,4.56579360254748,0,0,0.0714765441766563,0,0,0,0,1.86494547746733,0,0,41042.399349378,0,0,33.8709640152743,0,0,0,0,2.15930513953535,0.487671699929078,1.29485767437579,0,0,307.455058606435,0,0,0,0,0,0,0,1.09279780251979,0,0,0,0,0,19.4421634688364,0,0,0,0,0,0,0,0,6296.97687329413,0,0,0.0679914901909147,0,22.2191273016468,0,0,0,0,0,0,0,0,0,0,0,2.14371304124943,0,0,36519.7311442534,244.730235544725,0.193766729508018,0.186224142887574,0,0.0636471582781649,8.69103912520343,565.192677540512,360.029432741716,1069.75265803069,78802.6215090414,6828.18647846347,0,0,0,0,656.994638729672,0.611207220914332,12.2068853494722,0,0,0 | |||
|short_description=p1@PRR4 | |||
}} |
Latest revision as of 07:06, 16 September 2015
Short description: | p1@PRR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRR4_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | 0bp_to_ENST00000228811, ENST00000431566, ENST00000540107, ENST00000542658, ENST00000544994, NM_001098538, NM_007244, uc001qyz.3, uc001qza.3, uc009zhq.1_5end |
EntrezGene: | PRR4 |
HGNC: | 18020 |
UniProt: | Q16378E7ESM0F5H178F5H0D7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.70e-10 | 6 |
gland of oral region | 1.70e-10 | 6 |
gland of foregut | 1.70e-10 | 6 |
oral gland | 1.70e-10 | 6 |
oral cavity | 1.70e-10 | 6 |
subdivision of digestive tract | 1.23e-09 | 118 |
adult organism | 2.52e-09 | 114 |
open tracheal system trachea | 3.79e-09 | 2 |
major salivary gland | 5.16e-09 | 2 |
throat | 6.50e-09 | 2 |
digestive system | 1.26e-08 | 145 |
digestive tract | 1.26e-08 | 145 |
primitive gut | 1.26e-08 | 145 |
oral opening | 1.16e-07 | 22 |
foregut | 2.41e-07 | 87 |
endoderm-derived structure | 2.55e-07 | 160 |
endoderm | 2.55e-07 | 160 |
presumptive endoderm | 2.55e-07 | 160 |
orifice | 6.20e-07 | 36 |
respiratory system | 6.68e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.81e-08 | 2 |