FFCP PHASE1:Hg19::chr20:42295713..42295738,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:42295713..42295738,+
|short_description=p2@MYBL2
|description=CAGE_peak_2_at_MYBL2_5end
|association_with_transcript=4bp_to_NM_002466,uc002xla.1,uc002xlb....") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4605 | |EntrezGene=4605 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7548 | |HGNC=7548 | ||
|TSSclassifier=strong | |||
|UniProt=P10244 | |UniProt=P10244 | ||
|association_with_transcript=4bp_to_NM_002466,uc002xla.1,uc002xlb.1,uc010zwj.1_5end | |||
|cluster_id=chr20:42295713..42295738,+ | |||
|coexpression_cluster_id=C3792 | |||
|description=CAGE_peak_2_at_MYBL2_5end | |||
|id=chr20:42295713..42295738,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.14e-24!254;CL:0000012!9.96e-17!682;CL:0000548!1.70e-16!679;CL:0000004!1.70e-16!679;CL:0000255!1.70e-16!679;CL:0002321!1.75e-12!248;CL:0000220!7.22e-12!246;CL:0000003!6.02e-09!722;CL:0000076!9.60e-08!62;CL:0000063!1.32e-07!578;CL:0000133!2.16e-07!59;CL:0000333!2.43e-07!41;CL:0002319!3.81e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.25e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.69e-24,253;CL:0002321,4.79e-12,250;CL:0000076,1.21e-07,63;CL:0000133,1.24e-07,59;CL:0000333,1.55e-07,41;CL:0002319,2.84e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.19e-44!235;DOID:14566!2.78e-42!239;DOID:0050686!4.44e-22!137;DOID:0050687!4.94e-22!143;DOID:2531!1.11e-19!51;DOID:0060083!1.11e-19!51;DOID:305!4.30e-18!106;DOID:1240!1.17e-15!39;DOID:8692!5.50e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.86e-13;39!DOID:2531;2.15e-12;51!DOID:0060083;2.15e-12;51!DOID:8692;6.33e-12;31!DOID:0060058;8.73e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.67e-45,235;DOID:14566,1.76e-42,239;DOID:0050686,3.17e-22,137;DOID:0050687,7.68e-22,143;DOID:2531,4.28e-20,51;DOID:0060083,4.28e-20,51;DOID:305,3.92e-18,106;DOID:1240,5.57e-16,39;DOID:8692,3.19e-12,31;DOID:0060058,9.22e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;7.38e-07;24!UBERON:0011143;7.38e-07;24 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,0,0,0,0,0,0.261185628199839,26.7849990786645,57.9174969417115,29.7080266097034,12.6608149549658,0.247532705920093,1.65698687863958,0,0.602694528023977,0,0.975865597581014,22.9005168022825,20.196068433181,14.7323719094701,23.1851149576156,34.2186062682211,38.2905050764149,39.5057307716908,45.6479277341698,50.6897431660094,1.57345710739562,0,0.928896739896456,22.9855306119732,19.5783847205863,4.06729411183466,52.8326307957657,59.4267391797422,13.7992206487378,0,0,0,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,2.13365111283254,2.00197993518006,1.72425731986345,1.98313461835459,0.954053754535364,1.70763890732835,3.52342313622563,4.20500550937752,3.96513985737078,1.68152568894461,16.5931973408299,0,0,0,1.67186495390678,0,0,1.94826728407911,4.56782873229212,0,0.664601683750863,0.270803863765016,7.04502258491213,7.02320476823343,13.4839081775014,9.67225062250469,7.82468331484642,0,0,0,9.40467544389799,0,0,0,0.637130828648193,0,0,0.150575119077773,0.127986611154418,0,0.710331756132051,0,0,0.267440195783507,0,0,4.69490601792545,7.54389114876829,5.42158728576849,2.50668955317945,2.462390822334,5.5670016293577,1.94653948121054,13.7075484887898,9.09090529596512,10.1888351404026,3.99486180268024,19.3076502795047,16.3145154825149,0,0,0.132957960518865,6.43924685624423,6.86393892936153,2.60020250930695,31.8019851786728,15.4842227119102,23.952694610924,18.6551620834923,11.7459842138774,24.485505732666,28.632310415543,2.58416759169329,1.42306505074684,3.68192674041137,5.63961043952806,3.80136052859256,5.6134273236079,9.55924008899259,5.67099363517232,21.6105342447473,26.494465969888,30.405099730497,27.596994743859,39.8691577018614,17.5873674173191,0,0,11.3384453557059,0,4.93858995491861,0,1.43418310374407,6.38403087957043,8.41016400213461,17.0798393167528,4.44001587150888,6.22422070799533,6.06198024313596,12.7500284428498,1.36221684880438,0.576175924479999,28.3528932518894,0.936480230490962,18.2550982894224,2.69007624993242,14.9141813277581,16.5110403255494,17.9777032578878,3.0623125688234,16.3369642024651,1.75653827998801,2.37600571456411,3.21447008062124,11.8320977051943,5.74894513452991,23.2303837256611,24.523229894905,9.97430815743058,11.4134181429018,3.67785354958824,3.30523729594513,20.1909286024837,3.94657198515496,1.06778694409284,4.4505699243508,3.90118424909723,3.09157587715317,1.03056216018252,1.11670113798954,9.78902726999344,3.41029518064195,1.7670364197088,2.02509777013059,1.2931684545505,2.13005755509969,4.53384442024381,11.3605596848027,1.93260853163297,9.54611422067921,3.44165514466805,38.9096122553409,41.6143472529464,29.5132614888577,25.2932974237504,45.9223948593644,51.461807629692,3.12899064659632,3.21620469096443,23.4829366299217,0,0,22.005064807411,26.1306269621058,26.99323534695,26.9117293467041,28.7600866201976,25.6252268639984,24.2696354688296,24.1352402104176,26.5475538293009,11.8104872739944,33.658025712827,12.347220339942,13.2307840246988,0,0,0,73.282874502832,22.752861130476,9.95093299731448,1.20725313949488,7.86812272803337,14.7777589445097,6.75895649657266,5.86454949558584,18.7188261350324,7.21656710126366,6.72396348855446,0.821860859650752,9.81691844775302,18.0564349904878,8.18092854608773,12.6432703673484,23.1791263765616,1.23108503043699,1.63802985597466,6.8370334652815,0,2.01578553838631,5.10390350072591,8.59761817947344,10.4628217865026,20.3192819957562,0.985326475791887,2.3773077183571,0.207328115540772,0,0.25248486685276,20.0018367020332,6.49380323449072,15.2382681373061,10.2643467613623,16.5552263252351,10.5120070245371,1.42913216315289,22.0898236160361,10.0270815831654,31.9021543321133,0.129271715757778,3.57656445851882,18.596660556232,0.26593811658487,0,23.1486636835928,26.9513350844229,21.5801965003041,1.57275793023962,0,15.6415663988346,17.264017767568,0.710783897485092,14.2551337128017,0,0,4.1988656296464,1.2162378064119,1.50677127429638,0,1.91699884393266,0,18.5427976552934,2.60606352001643,3.49309748335652,6.26713371339634,33.1772026220841,0,0,0,20.5816645620195,10.4111883086097,10.8260433788877,11.3911060427357,14.6725912880228,0,0,0,0,0.500170521059677,1.08506009479894,1.87173775377726,4.63915370872621,2.05013139544115,4.80279801470124,0.300946099727719,0,5.17365356462525,10.627609576567,17.5150710114618,3.90976265106373,0.979005787313703,2.40200396667599,0.82707210449155,0.647142602455851,0.320182673410333,29.7065020017334,29.9583791118895,47.4752760527598,0.248107807818777,0.920771839728375,1.40330047216537,0.256278298511402,0,0,0,10.7946785661859,6.39222211127257,8.9518600055052,4.15403543346897,3.83494248917865,38.5541644197275,0.601519410909855,0,12.859218194436,10.3791965763829,0.655622074797121,24.8159787099077,16.9433741629712,123.142913760766,32.1506294237174,19.6326029740749,12.5106722477986,12.7570278957387,24.830330351746,47.8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| ||
|short_description=p2@MYBL2 | |||
}} | }} |
Latest revision as of 07:06, 16 September 2015
Short description: | p2@MYBL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYBL2_5end |
Coexpression cluster: | C3792_Renal_Alveolar_anaplastic_acute_testicular_lymphoma_diffuse |
Association with transcript: | 4bp_to_NM_002466, uc002xla.1, uc002xlb.1, uc010zwj.1_5end |
EntrezGene: | MYBL2 |
HGNC: | 7548 |
UniProt: | P10244 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.69e-24 | 253 |
embryonic cell | 4.79e-12 | 250 |
squamous epithelial cell | 1.21e-07 | 63 |
neurectodermal cell | 1.24e-07 | 59 |
migratory neural crest cell | 1.55e-07 | 41 |
neural cell | 2.84e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.67e-45 | 235 |
disease of cellular proliferation | 1.76e-42 | 239 |
organ system cancer | 3.17e-22 | 137 |
cell type cancer | 7.68e-22 | 143 |
hematologic cancer | 4.28e-20 | 51 |
immune system cancer | 4.28e-20 | 51 |
carcinoma | 3.92e-18 | 106 |
leukemia | 5.57e-16 | 39 |
myeloid leukemia | 3.19e-12 | 31 |
lymphoma | 9.22e-07 | 10 |