FFCP PHASE1:Hg19::chr5:150460539..150460640,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10318 | |EntrezGene=10318 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16903 | |HGNC=16903 | ||
|TSSclassifier=strong | |||
|UniProt=E7EW68,Q6N077 | |UniProt=E7EW68,Q6N077 | ||
|association_with_transcript=0bp_to_ENST00000518977,ENST00000520695,ENST00000520931,ENST00000521591,ENST00000522926_5end | |association_with_transcript=0bp_to_ENST00000518977,ENST00000520695,ENST00000520931,ENST00000521591,ENST00000522926_5end | ||
|cluster_id=chr5:150460539..150460640,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_TNIP1_5end | |description=CAGE_peak_1_at_TNIP1_5end | ||
|id=chr5:150460539..150460640,- | |id=chr5:150460539..150460640,- | ||
|ontology_enrichment_celltype=CL:0000738!5.15e-18!140;CL:0002057!3.73e-16!42;CL:0000766!4.81e-16!76;CL:0002087!1.13e-15!119;CL:0002009!5.63e-14!65;CL:0002194!5.81e-14!63;CL:0000576!5.81e-14!63;CL:0000040!5.81e-14!63;CL:0000559!5.81e-14!63;CL:0002031!1.66e-13!124;CL:0000860!1.84e-13!45;CL:0000557!7.08e-13!71;CL:0000839!1.70e-11!70;CL:0000988!2.45e-11!182;CL:0000037!6.09e-10!172;CL:0000566!6.09e-10!172;CL:0002032!1.23e-09!165;CL:0000837!1.23e-09!165;CL:0000359!8.86e-09!32;CL:0002371!9.76e-09!591;CL:0000222!2.23e-07!119;CL:0000763!3.67e-07!112;CL:0000049!3.67e-07!112;CL:1000497!9.34e-07!18;CL:0002518!9.34e-07!18 | |ontology_enrichment_celltype=CL:0000738!5.15e-18!140;CL:0002057!3.73e-16!42;CL:0000766!4.81e-16!76;CL:0002087!1.13e-15!119;CL:0002009!5.63e-14!65;CL:0002194!5.81e-14!63;CL:0000576!5.81e-14!63;CL:0000040!5.81e-14!63;CL:0000559!5.81e-14!63;CL:0002031!1.66e-13!124;CL:0000860!1.84e-13!45;CL:0000557!7.08e-13!71;CL:0000839!1.70e-11!70;CL:0000988!2.45e-11!182;CL:0000037!6.09e-10!172;CL:0000566!6.09e-10!172;CL:0002032!1.23e-09!165;CL:0000837!1.23e-09!165;CL:0000359!8.86e-09!32;CL:0002371!9.76e-09!591;CL:0000222!2.23e-07!119;CL:0000763!3.67e-07!112;CL:0000049!3.67e-07!112;CL:1000497!9.34e-07!18;CL:0002518!9.34e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.51e-15;33!CL:0002057;1.51e-15;33!CL:0000473;6.12e-12;39!CL:0000234;6.12e-12;39!CL:0000576;1.12e-09;48!CL:0000359;2.69e-08;32!CL:0000766;7.98e-08;69!CL:1000497;1.85e-07;17!CL:0002518;1.85e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.99e-19,136;CL:0000766,8.06e-18,72;CL:0002087,6.33e-17,115;CL:0000860,3.73e-16,42;CL:0002057,3.73e-16,42;CL:0002194,8.36e-16,59;CL:0000576,8.36e-16,59;CL:0000040,8.36e-16,59;CL:0000559,8.36e-16,59;CL:0002009,8.93e-16,61;CL:0000473,5.13e-15,48;CL:0000234,5.13e-15,48;CL:0002031,1.34e-14,120;CL:0000557,1.87e-14,67;CL:0000839,5.89e-13,66;CL:0000988,6.35e-12,177;CL:0000037,1.19e-10,168;CL:0002032,2.37e-10,161;CL:0000837,2.37e-10,161;CL:0000359,8.86e-09,32;CL:0000763,6.73e-08,108;CL:0000049,6.73e-08,108;CL:1000497,1.94e-07,17;CL:0002518,1.94e-07,17;CL:0000222,2.52e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002057;3.37e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.50e-34!216;UBERON:0002193!1.00e-18!112;UBERON:0002390!1.18e-16!102;UBERON:0003061!1.18e-16!102;UBERON:0003914!2.18e-14!118;UBERON:0000926!2.34e-14!448;UBERON:0004120!2.34e-14!448;UBERON:0006603!2.34e-14!448;UBERON:0001009!5.69e-14!113;UBERON:0002405!2.46e-13!115;UBERON:0004535!3.06e-13!110;UBERON:0000055!8.01e-13!69;UBERON:0004872!1.56e-11!84;UBERON:0001981!3.00e-11!60;UBERON:0007500!3.00e-11!60;UBERON:0004537!3.00e-11!60;UBERON:0006965!3.00e-11!60;UBERON:0002371!3.00e-10!80;UBERON:0001637!8.11e-10!42;UBERON:0003509!8.11e-10!42;UBERON:0004572!8.11e-10!42;UBERON:0002049!8.49e-09!79;UBERON:0007798!8.49e-09!79;UBERON:0001474!2.53e-08!86;UBERON:0000178!2.90e-08!15;UBERON:0000179!2.90e-08!15;UBERON:0000463!2.90e-08!15;UBERON:0004573!3.71e-08!33;UBERON:0004571!3.71e-08!33;UBERON:0002204!1.35e-07!167;UBERON:0003887!4.87e-07!21 | |ontology_enrichment_uberon=UBERON:0003081!1.50e-34!216;UBERON:0002193!1.00e-18!112;UBERON:0002390!1.18e-16!102;UBERON:0003061!1.18e-16!102;UBERON:0003914!2.18e-14!118;UBERON:0000926!2.34e-14!448;UBERON:0004120!2.34e-14!448;UBERON:0006603!2.34e-14!448;UBERON:0001009!5.69e-14!113;UBERON:0002405!2.46e-13!115;UBERON:0004535!3.06e-13!110;UBERON:0000055!8.01e-13!69;UBERON:0004872!1.56e-11!84;UBERON:0001981!3.00e-11!60;UBERON:0007500!3.00e-11!60;UBERON:0004537!3.00e-11!60;UBERON:0006965!3.00e-11!60;UBERON:0002371!3.00e-10!80;UBERON:0001637!8.11e-10!42;UBERON:0003509!8.11e-10!42;UBERON:0004572!8.11e-10!42;UBERON:0002049!8.49e-09!79;UBERON:0007798!8.49e-09!79;UBERON:0001474!2.53e-08!86;UBERON:0000178!2.90e-08!15;UBERON:0000179!2.90e-08!15;UBERON:0000463!2.90e-08!15;UBERON:0004573!3.71e-08!33;UBERON:0004571!3.71e-08!33;UBERON:0002204!1.35e-07!167;UBERON:0003887!4.87e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.99e-08;15!UBERON:0000179;2.99e-08;15!UBERON:0000463;2.99e-08;15!UBERON:0004573;2.36e-07;33!UBERON:0004571;2.36e-07;33!UBERON:0001637;8.07e-07;42!UBERON:0003509;8.07e-07;42!UBERON:0004572;8.07e-07;42 | |||
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|short_description=p1@TNIP1 | |short_description=p1@TNIP1 | ||
}} | }} |
Latest revision as of 07:31, 16 September 2015
Short description: | p1@TNIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNIP1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000518977, ENST00000520695, ENST00000520931, ENST00000521591, ENST00000522926_5end |
EntrezGene: | TNIP1 |
HGNC: | 16903 |
UniProt: | E7EW68Q6N077 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.99e-19 | 136 |
myeloid leukocyte | 8.06e-18 | 72 |
nongranular leukocyte | 6.33e-17 | 115 |
classical monocyte | 3.73e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.73e-16 | 42 |
monopoietic cell | 8.36e-16 | 59 |
monocyte | 8.36e-16 | 59 |
monoblast | 8.36e-16 | 59 |
promonocyte | 8.36e-16 | 59 |
macrophage dendritic cell progenitor | 8.93e-16 | 61 |
defensive cell | 5.13e-15 | 48 |
phagocyte | 5.13e-15 | 48 |
hematopoietic lineage restricted progenitor cell | 1.34e-14 | 120 |
granulocyte monocyte progenitor cell | 1.87e-14 | 67 |
myeloid lineage restricted progenitor cell | 5.89e-13 | 66 |
hematopoietic cell | 6.35e-12 | 177 |
hematopoietic stem cell | 1.19e-10 | 168 |
hematopoietic oligopotent progenitor cell | 2.37e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.37e-10 | 161 |
vascular associated smooth muscle cell | 8.86e-09 | 32 |
myeloid cell | 6.73e-08 | 108 |
common myeloid progenitor | 6.73e-08 | 108 |
kidney cell | 1.94e-07 | 17 |
kidney epithelial cell | 1.94e-07 | 17 |
mesodermal cell | 2.52e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 4.37e-33 | 203 |
hemolymphoid system | 3.24e-20 | 108 |
hematopoietic system | 4.03e-18 | 98 |
blood island | 4.03e-18 | 98 |
mesoderm | 1.08e-16 | 315 |
mesoderm-derived structure | 1.08e-16 | 315 |
presumptive mesoderm | 1.08e-16 | 315 |
epithelial tube | 1.03e-14 | 117 |
immune system | 3.94e-14 | 93 |
circulatory system | 1.08e-13 | 112 |
cardiovascular system | 5.78e-13 | 109 |
vessel | 1.58e-12 | 68 |
bone marrow | 1.84e-11 | 76 |
splanchnic layer of lateral plate mesoderm | 2.95e-11 | 83 |
epithelial tube open at both ends | 5.86e-11 | 59 |
blood vessel | 5.86e-11 | 59 |
blood vasculature | 5.86e-11 | 59 |
vascular cord | 5.86e-11 | 59 |
artery | 8.11e-10 | 42 |
arterial blood vessel | 8.11e-10 | 42 |
arterial system | 8.11e-10 | 42 |
bone element | 2.62e-09 | 82 |
vasculature | 1.52e-08 | 78 |
vascular system | 1.52e-08 | 78 |
blood | 2.90e-08 | 15 |
haemolymphatic fluid | 2.90e-08 | 15 |
organism substance | 2.90e-08 | 15 |
systemic artery | 3.71e-08 | 33 |
systemic arterial system | 3.71e-08 | 33 |
musculoskeletal system | 1.67e-07 | 167 |
skeletal element | 4.46e-07 | 90 |